Detail information of GWHGAAEX004240/evm.TU.scaffold_147.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720012310|ref|XP_010259825.1|2.25E-20PREDICTED: zinc finger protein 2 [Nelumbo nucifera]
Swissprottr|Q39261|ZFP2_ARATH7.00E-19Zinc finger protein 2
trEMBLtr|F6GXF3|F6GXF3_VITVI2.00E-19Putative uncharacterized protein {ECO:0000313|EMBL:CCB44639.1}
TAIRAT5G575202.00E-18zinc finger protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000150988852989273-
Transcript Sequence

Network for GWHGAAEX004240

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.450
SRR2545915Juvenile tuber0.330
SRP108465SRR5643513five period of Gastrodia elata25.620
SRR5643514five period of Gastrodia elata48.180
SRR5643515five period of Gastrodia elata24.730
SRR5643524five period of Gastrodia elata18.810
SRR5643525five period of Gastrodia elata12.010
SRR5643528five period of Gastrodia elata1.800
SRR5643658five period of Gastrodia elata2.450
SRR5643659five period of Gastrodia elata2.240
SRR5643660five period of Gastrodia elata1.250
SRR5643661five period of Gastrodia elata0.940
SRR5643662five period of Gastrodia elata8.680
SRR5643663five period of Gastrodia elata2.380
SRR5643664five period of Gastrodia elata5.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.650
SRR6049655Rhizomagastrodiae_C368-T10_good_1105.950
SRR6049656Rhizomagastrodiae_C368-T07_good_147.390
SRR6049657Rhizomagastrodiae_C368-T07_good_114.780
SRR6049658Rhizomagastrodiae_C368-T04_good_152.300
SRR6049659Rhizomagastrodiae_C368-T04_good_158.380
SRR6049660Rhizomagastrodiae_C368-T01_good_114.880
SRR6049661Rhizomagastrodiae_C368-T04_good_121.400
SRR6049662Rhizomagastrodiae_C368-T01_good_158.320
SRR6049663Rhizomagastrodiae_C368-T01_good_119.940
SRR6049664Rhizomagastrodiae_C368-T10_good_1117.710
SRR6049665Rhizomagastrodiae_C368-T10_good_1117.710
SRP279888GastroGastrodia elata tuber 5.92
JuvenJuvenile tuber5.73
Mother_GastroMother tuber of Gastrodia elata 54.89
Mother_JuvenMother tuber of Juvenile 9.46