Detail information of GWHGAAEX004243/evm.TU.scaffold_147.47
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 5.00E-30 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG0192 | 0 | Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs |
| nr | gi|672176538|ref|XP_008808338.1| | 0 | PREDICTED: uncharacterized protein LOC103720427 isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q9FPR3|EDR1_ARATH | 4.00E-51 | Serine/threonine-protein kinase EDR1 |
| trEMBL | tr|M0TBI6|M0TBI6_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P30410_001} |
| TAIR | AT5G57610_2 | 0 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000150 | 1220776 | 1242857 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004243
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00564.23 | PB1 | 60 | 145 | 4.30E-17 |
| PF07714.16 | Pkinase_Tyr | 723 | 985 | 1.20E-61 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | TKL-Pl-6 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0005515 | Molecular Function | protein binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 27.350 |
| SRR2545915 | Juvenile tuber | 18.190 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.880 |
| SRR5643514 | five period of Gastrodia elata | 19.730 | |
| SRR5643515 | five period of Gastrodia elata | 18.270 | |
| SRR5643524 | five period of Gastrodia elata | 18.630 | |
| SRR5643525 | five period of Gastrodia elata | 29.850 | |
| SRR5643528 | five period of Gastrodia elata | 28.060 | |
| SRR5643658 | five period of Gastrodia elata | 30.930 | |
| SRR5643659 | five period of Gastrodia elata | 21.900 | |
| SRR5643660 | five period of Gastrodia elata | 23.400 | |
| SRR5643661 | five period of Gastrodia elata | 21.320 | |
| SRR5643662 | five period of Gastrodia elata | 21.710 | |
| SRR5643663 | five period of Gastrodia elata | 22.510 | |
| SRR5643664 | five period of Gastrodia elata | 24.220 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 23.350 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 23.720 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 21.560 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 24.720 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 26.300 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 28.510 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 27.350 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 24.990 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 20.500 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.520 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.120 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.120 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 22.54 |
| Juven | Juvenile tuber | 30.87 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.13 | |
| Mother_Juven | Mother tuber of Juvenile | 26.25 |