Detail information of GWHGAAEX004244/evm.TU.scaffold_147.48
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|94971261|ref|YP_593309.1| | 3.00E-27 | serine/threonine protein kinase [Candidatus Koribacter versatilis Ellin345] |
| KOG | KOG0581 | 8.00E-151 | Mitogen-activated protein kinase kinase (MAP2K) |
| nr | gi|743811734|ref|XP_010929235.1| | 4.98E-176 | PREDICTED: mitogen-activated protein kinase kinase 4-like [Elaeis guineensis] |
| Swissprot | tr|Q8RXG3|M2K5_ARATH | 2.00E-151 | Mitogen-activated protein kinase kinase 5 |
| trEMBL | tr|K7V635|K7V635_MAIZE | 3.00E-166 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM5G834697_P01} |
| TAIR | AT3G21220 | 8.00E-151 | MAP kinase kinase 5 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000150 | 1248386 | 1249839 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004244
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module13 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 59 | 315 | 1.50E-63 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | STE_STE7 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13413 | MKK4_5 | MAPK signaling pathway - plant | map04016 |
| Plant hormone signal transduction | map04075 | ||
| Plant-pathogen interaction | map04626 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 34.770 |
| SRR2545915 | Juvenile tuber | 40.050 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 38.550 |
| SRR5643514 | five period of Gastrodia elata | 25.700 | |
| SRR5643515 | five period of Gastrodia elata | 56.390 | |
| SRR5643524 | five period of Gastrodia elata | 20.690 | |
| SRR5643525 | five period of Gastrodia elata | 94.320 | |
| SRR5643528 | five period of Gastrodia elata | 59.450 | |
| SRR5643658 | five period of Gastrodia elata | 41.780 | |
| SRR5643659 | five period of Gastrodia elata | 115.140 | |
| SRR5643660 | five period of Gastrodia elata | 61.160 | |
| SRR5643661 | five period of Gastrodia elata | 85.210 | |
| SRR5643662 | five period of Gastrodia elata | 171.150 | |
| SRR5643663 | five period of Gastrodia elata | 99.400 | |
| SRR5643664 | five period of Gastrodia elata | 206.860 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 171.340 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 134.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 108.650 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 121.260 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 103.080 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 115.220 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 202.320 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 101.520 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 60.700 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 126.880 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 103.270 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 103.270 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 68.48 |
| Juven | Juvenile tuber | 39.88 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 71.02 | |
| Mother_Juven | Mother tuber of Juvenile | 80.03 |