Detail information of GWHGAAEX004268/evm.TU.scaffold_147.74


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|312112978|ref|YP_004010574.1|5.00E-106NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC 17100]
KOGKOG13710UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase
nrgi|573920883|ref|XP_006648037.1|0PREDICTED: UDP-glucuronate 4-epimerase 1-like [Oryza brachyantha]
Swissprottr|Q9M0B6|GAE1_ARATH0UDP-glucuronate 4-epimerase 1
trEMBLtr|J3LHW6|J3LHW6_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB02G42330.1}
TAIRAT4G304400UDP-D-glucuronate 4-epimerase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015018520741853859+
Transcript Sequence

Network for GWHGAAEX004268

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01370.20Epimerase843202.30E-47
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K08679E5.1.3.6 Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms78.570
SRR2545915Juvenile tuber171.960
SRP108465SRR5643513five period of Gastrodia elata298.810
SRR5643514five period of Gastrodia elata191.440
SRR5643515five period of Gastrodia elata280.610
SRR5643524five period of Gastrodia elata168.490
SRR5643525five period of Gastrodia elata218.570
SRR5643528five period of Gastrodia elata125.580
SRR5643658five period of Gastrodia elata174.490
SRR5643659five period of Gastrodia elata596.100
SRR5643660five period of Gastrodia elata831.530
SRR5643661five period of Gastrodia elata677.740
SRR5643662five period of Gastrodia elata888.830
SRR5643663five period of Gastrodia elata878.270
SRR5643664five period of Gastrodia elata1034.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1196.720
SRR6049655Rhizomagastrodiae_C368-T10_good_1317.170
SRR6049656Rhizomagastrodiae_C368-T07_good_1181.160
SRR6049657Rhizomagastrodiae_C368-T07_good_1168.560
SRR6049658Rhizomagastrodiae_C368-T04_good_1161.380
SRR6049659Rhizomagastrodiae_C368-T04_good_1142.270
SRR6049660Rhizomagastrodiae_C368-T01_good_1102.770
SRR6049661Rhizomagastrodiae_C368-T04_good_1168.770
SRR6049662Rhizomagastrodiae_C368-T01_good_1108.820
SRR6049663Rhizomagastrodiae_C368-T01_good_187.080
SRR6049664Rhizomagastrodiae_C368-T10_good_1173.640
SRR6049665Rhizomagastrodiae_C368-T10_good_1173.640
SRP279888GastroGastrodia elata tuber 679.60
JuvenJuvenile tuber67.05
Mother_GastroMother tuber of Gastrodia elata 60.70
Mother_JuvenMother tuber of Juvenile 54.39