Gene detail

Detail information of GWHGAAEX004269/evm.TU.scaffold_147.76

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|302037345\|ref\|YP_003797667.1\|	1.00E-26	putative serine/threonine protein kinase [Candidatus Nitrospira defluvii]
KOG	KOG0582	0	Ste20-like serine/threonine protein kinase
nr	gi\|743811588\|ref\|XP_010929201.1\|	0	PREDICTED: serine/threonine-protein kinase 4-like isoform X1 [Elaeis guineensis]
Swissprot	tr\|O23304\|BLUS1_ARATH	3.00E-94	Serine/threonine-protein kinase BLUS1
trEMBL	tr\|A0A067L0G8\|A0A067L0G8_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP41922.1}
TAIR	AT5G14720	0	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000150	1857053	1873630	+

Transcript Sequence
>GWHTAAEX004269 CTCTTTCGGTCCTCGTTCTCCCCGCTCCTGCCATTAATGCTTGCCCTCCCATAATCCCATACAGATTCCTCCCTTCCCCTCTTCATCTTCCTCCTTTTCTAGGAATATTAGCACACAGCTGCACCATGGAGCGGAAGAAGTATCCGATCCGTGCAGAGGACTACGATCTGTACGAAATGGTTGGCCAGGGAGCCAGCGCCGTGGTGCGGCGCGCCCTCTGCATCCCTCTGAACGAGATCGTCGCAGTCAAGATTATCGACTTCGAGCGCCATGGCAGCGATCTGAGCAACATCTCTCGGGAGGCGCAGATTATGATCTTGATAGATCACGCTAATGTTCTCAATGCGCACTGCTCCTTCGTGAAGGATCACACTTTGTGGGTAGTCATGCAGTACATGGCGGGAGGGTCCTGTCTACACATCATGAAATCAGCATTTCCGGATGGTTTCGAGGAATTGATCATTGCCACAATTTTGAAGGAGGTGCTCAAAGGCCTGGATTATCTTCATCGTCACGGGCATATACATCGCGATGTGAAAGCTGGCAATATTCTAGTTGATGCTAAAGGTGGAATCAAACTTGGAGATTTTGGAGTTTCTGCTTGCCTTTTTGATTCAGGTGATAGGCAACGTTCGAGAAATACATTTGTTGGAACACCATGCTGGATGGCACCTGAGGTGATGGAGCAATTGAATGGCTATGATTTCAAGGCTGATATATGGTCTTTTGGAATTACTGCTTTGGAACTTGCTCACGGTCATGCACCTTTTTCTAAATACCCTCCAATGAAGGTTCTATTGATGACTTTGCAAAATGCACCTCCCGGTCTTGACTATGAAAGAGATAAGAAGTTTTCAAGAAATTTCAAACATATGATTGCATCCTGCTTGGTTAAAGATCCTTCGAAGAGGCCAACAGCTCAAAAGCTGTTAAAACACAAATTCTTCAGGCAAGCTAGATCTCAAGATTATGTTGCTCGAAAAATCTTGGAAAATTTGGCAACTCTTGGTGATCGATACCAAGCACTAAAGGAGAAGGAAGAAGACTTGCTTGCACAAAAAAAGATGCCTGATGGAAAAAAAGAAGAGATCTCACAGAATGAATATAAAAGAGGAATAAGTGGGTGGAACTTTGATATTGAGGACCTGAAGGCCCAAGCTTCATTGGTCCCATGTAATGAGGAAGCTGGAAAAGATCAAGGAGTTTCAAATTCATTTTTTGAGTGCGACAATTTGCTAGATAGATCCTATTCCAGAATTAGTTCGTTCAAGGGATGTGATGACATTGAAAGTAATGGGATGCAGAACAAATCATCCATCTTCTTACCGCCTGATGAAACAACTTGTTCTCAAAGAAACAAGCCTGATGGAACTGATAATGAGTTGAAGAATGTGGAGATGAACGATCAACAAGATGTGACACAGTTGCGAAGGATGGAGATAAATAACCATACTAAAAGCTGTGAAAAAATTTCAAATGGGCATTCTGTTGTCACACCGATTGAAAAGGTTCCAACCTCTTCAGAAATTGCTGAAAAAAATGTGAATGGTTTTTCTATTCATATTTCTGAGGAGCCAAGGGTTTGTGCAAATTACCCAACTGATGTTTCTTTGATGTCCAAAGGGGAAAGTCTGAAGCAGCAGAATCAGCAACAAAACGTCACCTATTCAAATGGAGAGGTTTCCCAGACAACCAATGAGTCAACCACCGAGATTGCGCTCAATAAAACTAAACCAACTATTACAAATGGTGATGACATTGATGACAAGTCAAAGGCACCTGTTGTTCAACAAAAAGGGCGTTTCAAGGTGACTTCTGAAAGCATTGATTTTGATAAGTCATCTTCTTCCCACTGTCTACAAAAGAGTCACAGCATCCAGGTGATTTCTCAGCTTCAACAGCCAAGCCTTTCAACGTCAGCTGATTCCATTCCAAGTTTTGCGCACTCACTTTTCCCACAGTTGACTTTCATACTGCAGAGCAATATCGCGCAAAGGGATTATATTCTTGGTATGATGAAACAGATGAGCACACGTGATTCATCCGCCAACCGTCCAACTGAGGGAGGATCATTTCTTTCACTCACTGCAGCTACTACGGAGAAGTCATTATTAGAAGCTGCTCACGAAAGAGAGAAAGAGCTGCTGCAAGAAATCAGTGATTTACATTGGAGGCTCTCATGCTCACTGGAAGAGGTTCAGAAGCTAAAAGCAAAGAATGCTCAGGTTTAGCTGCAGTTTTCTTTCGGCGGTCTGAACTCCGTACATTAATAGAATATTGAGCTGATGAAGCCCTCGCTTTACATTTGGAGCAGCAGGAAAAGAGCTTTGATTTTTTTTTTTTTTTTTTT

Network for GWHGAAEX004269

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	14	274	3.00E-59

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	STE_STE20-Fray

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.060
SRP064423	SRR2545915	Juvenile tuber	0.040
SRP108465	SRR5643513	five period of Gastrodia elata	0.300
	SRR5643514	five period of Gastrodia elata	0.740
	SRR5643515	five period of Gastrodia elata	0.150
	SRR5643524	five period of Gastrodia elata	0.470
	SRR5643525	five period of Gastrodia elata	0.280
	SRR5643528	five period of Gastrodia elata	0.170
	SRR5643658	five period of Gastrodia elata	0.170
	SRR5643659	five period of Gastrodia elata	0.110
	SRR5643660	five period of Gastrodia elata	0.030
	SRR5643661	five period of Gastrodia elata	0.240
	SRR5643662	five period of Gastrodia elata	0.640
	SRR5643663	five period of Gastrodia elata	0.200
	SRR5643664	five period of Gastrodia elata	0.160
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.580
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.290
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.940
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.590
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.220
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.320
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.170
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.960
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.370
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.590
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.590
SRP279888	Gastro	Gastrodia elata tuber	0.26
	Juven	Juvenile tuber	0.20
	Mother_Gastro	Mother tuber of Gastrodia elata	0.62
	Mother_Juven	Mother tuber of Juvenile	0.71