Gene detail

Detail information of GWHGAAEX004274/evm.TU.scaffold_147.81

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0242	0	Kinesin-like protein
nr	gi\|743857265\|ref\|XP_010942077.1\|	0	PREDICTED: centromere-associated protein E [Elaeis guineensis]
Swissprot	tr\|Q8S950\|NACK1_TOBAC	6.00E-82	Kinesin-like protein NACK1
trEMBL	tr\|M0SKB5\|M0SKB5_MUSAM	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT3G10180	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000150	2086394	2169660	+

Transcript Sequence
>GWHTAAEX004274 GGAAAATTGAGTCTTTTTTTGAAGCCCTATCTCGCAGTTTGCCCTCCCCATTCCTATCTGCAGCGAATGGAGAGGATTTTCGTCGCAGTTCGGGCACGGCCACTAGCACCCGAAGAGTCGAGCCTTTGGAGAATTTCTGGCGACTCGATCTTCCTAGCGAACTCAGTGACCAAGTTCGACTTTGATAGGGTTTTTGGGGAGGATAGTAAGACTGTTGATATATTTGAGGCGCGAACGAAGGATATTGTTGCCTCCGTGGTTTGTGGGTTCAATGGTACCGTTTTTGCTTATGGGCAAACCAGTAGTGGGAAAACGTATACCATGAGAGGATCTGCAAATGAACCAGGAATCATCCCACTTTCTGTGTTCGAATTGTTCTATAGCATTCATGAGAAAATGGATAGGGAATTCCTAGTTCGAGTGTCCTACATGGAGATATACAATGAAGAGATCAATGATTTATTGGCCCCCGAGCATAGAAAGCTGCAAATTCATGAATCTCTTGAGAGAGGCATATATGTTACTGGTTTGAAGGAGGAAATCGTTAACTCCCCTGAACAAGTTCTTGAACTAGTTGAATTTGGTGAATCTCATCGCCATATTGGGGAAACAAATATGAACCTTTACAGCAGCAGGTCTCATACCATTTTTCGCATGATTGTTGAAAGCAGGGAGAGAGGTGAAGAAGGTGATTCAATTAATTGTTGTGATGCTGTACGTGTATCAGTTCTCAACTTGGTGGATTTGGCTGGATCTGAACGTGCTGTAAAGACCGGAGCAGATGGTACACGTTTGAAAGAGGGCTCCCATATTAATAAAAGTTTATTGACCCTTGGCACTGTTATAAAAAAACTTAGTGAGGGGGCCGAAAGCCAAGGTGGACATGTACCTTATCGTGACAGTAAGCTCACTCGCATTTTGCAACCAGCCCTTGGTGGAAATGCAAATACTGCCATGATTTGTAACGTTACTTTTTCACAGATTCATGCTGACGAGACAAAATGTAGTCTCCTGTTTGCAAGTAGAGCTCTTCAAGTGAAAAACTGTGCCTGTGTGAATGAGATTTTGACAGATGCTGCTCTTTTGAAGCGTCAAAAAAAGGAAATTGAGGAGCTTCGTGCAAAGTTGCTGAGCTGTAGGTCTGAGCACCTCGAGGAAGAAGTACTTAATCTGAGGAACACCCTATTACATAGTGAGCTTGAAAAGGAGAGAATTGCTTTAGAGTTGGAGGAGGAAAAGAAAGATAAAGCATATCGCGAGAGAAAATTACTAGAACAAGCAAAGAAGATTGAAAATCTTAGTTCACTGATTTTATGTACTGAAAGAGATGATAGAGTAATTCATTCCATCAAGCTAAAGAGGCGGCTAACTTGGTGTCCTGGACCATTTCTGCATAAATTATCTGATGAGCTAGATGCTGACATCATGGAAGTTGGTGATGAGGAGACAGAATTGCTGCATCCTTCCAGCAATCTTGTTCAAGAATATGAGAACCTTGTGGATAATATTCCTTTAGTTGCTGATTTTGTAGATAAGCAGTTTTCACTTCCGGATTCACGTGCTTTATTGAATGTGACCAGCAGAAGAAAAATTCGTCAAAATTGTTCAAATATTACTATGGAAGGTGGCCAATTGGTTAAACAGCTAATAGAATTTGCTGATCTTTTCTTTCAGGATGATGCTAAGCTGCAATCATCTCCTACAAAAAGCAATTTTTCTTTGTGTCATTTAATGGAAGATGCACCTGAAGGTCTAAACAACTTGACTTTACGGGAACCAAAGTCAATTCATGGTATTAAACATCTTCACGAACAGGAAACCGATGGTGACAAAGTTTTCAAGCTTTCTCTCTCAAATGGAGAGATTACTTCGCATTTTGGTCTTTTTAGGCATTCATATAATGATGTTTTTACTATCATGGAAGAATGCTTCCAGTTTTTATCCATCTTGTCTGAAAAAGTGGAGAGTTTTAAGATGCTTTCTAGGCTGTGTTTGGCGCAATTGAAGTCCATTATTTCAGGCCATGAAAGCATCAGTAATTTTTTAACCAAGAAGTACAAGGAAGTTGAACTTGAAAAGGAGCTTTTAAGCGCTCGGTTATATGATTATCAGAACCAAATCTGTGAGCTTTTGTCTAACTTAGAGAACAAGGAGAAGATTGCTGTGGAACAAGTACTTTGTCATGATATGGAGAAGAATGAACTCCTCTCTCAGGTGCTTCATCTTCAGAAGGAAGTCTCACAATTATCATCCTGCTCTCTCACACGGGAGATGGAAGCTTTGAAAAACGAGCTAGACAAGAGCAAATTAAAATTGAAGGATGCTGAGTGCAAGTTAAAGAATGTTCTTCAGGACAAAATCAAGCTTGAGGGTGAAAAAGCTCAAGCTGAACGAGAAATTAAGAACTTGCAAGGTCAACGAGCTTTTCTTGAACGTGATATCTTGAAACAGGACTCTCTTTTTGATGCAAGGCGTGAATCAAAGTCTGATTTTAAAAAGAATGGCAATGAGAGGTTTGAAATCATTGCTTTTGAGTTGGAAGCTGAGATTTCTTCTCTGAAGGAGGCATTAGAAACCTCAATGGGTGAAAAGGAGGAAGCATCTATAAATAATGAAGTTCTAAACTTGGAGTTAGAAGATGTGGCAAAAAAATTGAACATCGCATATTTTGAAATGGAATTGCTAAAGGAGAACCTTGAAAGAATGGAAAAAAGGTTAGCTGATTCGGAATATTCATCTAAAATATTGGAAGATTCACTCAAGTTGCTATTTAAGGAAAAAGAAGACATGATCTTGGTACATAATGAGTTGAACTTGTGTAAAGATCAGTGCAATGGTTGTAAAGAAAAGCTCTACCTGTCAGAAGAAAATTTTAAGAGATCGGACCCCAGCATGACCAAGTTTTCAGATAGTGGGGAACTAACAGAAGAATCTAACAGGTTTATATCTGTTAAAGATGGAAATGAGGATTTGCTCTTATCACATTCCTATACTACGAGCATTGAAGTTGACAATCTCAAAAGCAGCATTCTTAAAGTAACGACAGAGAGAGACAACTTGCTTACTGAAGTTGAGCAGTTGAGATGGCTCCATGTTAAATTAGATACCTTTGAAGGAAAATATGATGACCTGAAATCAAATGCTGAATTTTTTTTGCAAGAGCTGAATCACAGGATCTCCAGCTTTGAAGTAGATATCAAAAAGGCTGATTTTGGCAACATTGAAGAGTTGTGTGAGTTGAGGAAGAAGCTCAACTCGACGGAGGTGGAGTTAGAGAGCTGCCATAGAAGGCTAATGGAGTCCTTAAATGAGAAGAAGAAGATGGACGTCAAGTACCGGGAAGCTTCGGATATGCTTAAAAATGAGCTTCGAACGTGTGGTCAGATTATTCTTGACTTGATGAATCGCTTATCTGAAAAGACATAAAGCCATTTTTACTAGTGTTCATTGAAAAAAATAGCTCATATTCTTTTGTAGCAGAGATTTTAATTTAAC

Network for GWHGAAEX004274

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	32	323	9.60E-104

Protein Sequence

>GWHPAAEX004274
MERIFVAVRARPLAPEESSLWRISGDSIFLANSVTKFDFDRVFGEDSKTVDIFEARTKDIVASVVCGFNGTVFAYGQTSSGKTYTMRGSANEPGIIPLSVFELFYSIHEKMDREFLVRVSYMEIYNEEINDLLAPEHRKLQIHESLERGIYVTGLKEEIVNSPEQVLELVEFGESHRHIGETNMNLYSSRSHTIFRMIVESRERGEEGDSINCCDAVRVSVLNLVDLAGSERAVKTGADGTRLKEGSHINKSLLTLGTVIKKLSEGAESQGGHVPYRDSKLTRILQPALGGNANTAMICNVTFSQIHADETKCSLLFASRALQVKNCACVNEILTDAALLKRQKKEIEELRAKLLSCRSEHLEEEVLNLRNTLLHSELEKERIALELEEEKKDKAYRERKLLEQAKKIENLSSLILCTERDDRVIHSIKLKRRLTWCPGPFLHKLSDELDADIMEVGDEETELLHPSSNLVQEYENLVDNIPLVADFVDKQFSLPDSRALLNVTSRRKIRQNCSNITMEGGQLVKQLIEFADLFFQDDAKLQSSPTKSNFSLCHLMEDAPEGLNNLTLREPKSIHGIKHLHEQETDGDKVFKLSLSNGEITSHFGLFRHSYNDVFTIMEECFQFLSILSEKVESFKMLSRLCLAQLKSIISGHESISNFLTKKYKEVELEKELLSARLYDYQNQICELLSNLENKEKIAVEQVLCHDMEKNELLSQVLHLQKEVSQLSSCSLTREMEALKNELDKSKLKLKDAECKLKNVLQDKIKLEGEKAQAEREIKNLQGQRAFLERDILKQDSLFDARRESKSDFKKNGNERFEIIAFELEAEISSLKEALETSMGEKEEASINNEVLNLELEDVAKKLNIAYFEMELLKENLERMEKRLADSEYSSKILEDSLKLLFKEKEDMILVHNELNLCKDQCNGCKEKLYLSEENFKRSDPSMTKFSDSGELTEESNRFISVKDGNEDLLLSHSYTTSIEVDNLKSSILKVTTERDNLLTEVEQLRWLHVKLDTFEGKYDDLKSNAEFFLQELNHRISSFEVDIKKADFGNIEELCELRKKLNSTEVELESCHRRLMESLNEKKKMDVKYREASDMLKNELRTCGQIILDLMNRLSEKT

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0003777	Molecular Function	microtubule motor activity
GO:0005524	Molecular Function	ATP binding
GO:0008017	Molecular Function	microtubule binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.890
SRP064423	SRR2545915	Juvenile tuber	2.220
SRP108465	SRR5643513	five period of Gastrodia elata	2.270
	SRR5643514	five period of Gastrodia elata	2.470
	SRR5643515	five period of Gastrodia elata	1.900
	SRR5643524	five period of Gastrodia elata	2.400
	SRR5643525	five period of Gastrodia elata	0.990
	SRR5643528	five period of Gastrodia elata	0.910
	SRR5643658	five period of Gastrodia elata	0.880
	SRR5643659	five period of Gastrodia elata	1.400
	SRR5643660	five period of Gastrodia elata	1.520
	SRR5643661	five period of Gastrodia elata	1.630
	SRR5643662	five period of Gastrodia elata	0.650
	SRR5643663	five period of Gastrodia elata	1.150
	SRR5643664	five period of Gastrodia elata	0.990
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.750
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.990
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.540
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.440
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.410
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.640
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.470
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.830
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.190
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.700
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.700
SRP279888	Gastro	Gastrodia elata tuber	1.39
	Juven	Juvenile tuber	1.68
	Mother_Gastro	Mother tuber of Gastrodia elata	1.79
	Mother_Juven	Mother tuber of Juvenile	2.06