Detail information of GWHGAAEX004285/evm.TU.scaffold_147.95


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|284037297|ref|YP_003387227.1|2.00E-35signal peptide peptidase SppA, 67K type [Spirosoma linguale DSM 74]
nrgi|672168811|ref|XP_008804419.1|0PREDICTED: serine protease SPPA, chloroplastic [Phoenix dactylifera]
Swissprottr|Q9C9C0|SPPA1_ARATH1.00E-148Serine protease SPPA, chloroplastic (Precursor)
trEMBLtr|A0A067FR12|A0A067FR12_CITSI5.00E-164Uncharacterized protein {ECO:0000313|EMBL:KDO65621.1}
TAIRAT1G739905.00E-148signal peptide peptidase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015024664012534547+
Transcript Sequence

Network for GWHGAAEX004285

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01343.17Peptidase_S492153501.10E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008233Molecular Functionpeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.670
SRR2545915Juvenile tuber16.850
SRP108465SRR5643513five period of Gastrodia elata5.940
SRR5643514five period of Gastrodia elata6.890
SRR5643515five period of Gastrodia elata7.150
SRR5643524five period of Gastrodia elata7.180
SRR5643525five period of Gastrodia elata5.170
SRR5643528five period of Gastrodia elata6.120
SRR5643658five period of Gastrodia elata7.760
SRR5643659five period of Gastrodia elata5.770
SRR5643660five period of Gastrodia elata6.060
SRR5643661five period of Gastrodia elata4.660
SRR5643662five period of Gastrodia elata6.120
SRR5643663five period of Gastrodia elata5.690
SRR5643664five period of Gastrodia elata6.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.350
SRR6049655Rhizomagastrodiae_C368-T10_good_17.100
SRR6049656Rhizomagastrodiae_C368-T07_good_16.260
SRR6049657Rhizomagastrodiae_C368-T07_good_17.590
SRR6049658Rhizomagastrodiae_C368-T04_good_17.930
SRR6049659Rhizomagastrodiae_C368-T04_good_18.120
SRR6049660Rhizomagastrodiae_C368-T01_good_15.770
SRR6049661Rhizomagastrodiae_C368-T04_good_16.650
SRR6049662Rhizomagastrodiae_C368-T01_good_15.700
SRR6049663Rhizomagastrodiae_C368-T01_good_15.780
SRR6049664Rhizomagastrodiae_C368-T10_good_17.880
SRR6049665Rhizomagastrodiae_C368-T10_good_17.880
SRP279888GastroGastrodia elata tuber 7.74
JuvenJuvenile tuber9.50
Mother_GastroMother tuber of Gastrodia elata 5.24
Mother_JuvenMother tuber of Juvenile 8.06