Detail information of GWHGAAEX004293/evm.TU.scaffold_147.104


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|115471855|ref|NP_001059526.1|4.22E-61Os07g0442900 [Oryza sativa Japonica Group]
Swissprottr|Q6YT98|CSPL7_ORYSJ2.00E-63CASP-like protein 1D1
trEMBLtr|I1QAD1|I1QAD1_ORYGL4.00E-61CASP-like protein {ECO:0000256|RuleBase:RU361233}
TAIRAT3G063901.00E-33Uncharacterised protein family (UPF0497)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015026264022629347-
Transcript Sequence

Network for GWHGAAEX004293

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04535.11DUF588301843.20E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.490
SRR2545915Juvenile tuber58.670
SRP108465SRR5643513five period of Gastrodia elata268.870
SRR5643514five period of Gastrodia elata166.440
SRR5643515five period of Gastrodia elata218.920
SRR5643524five period of Gastrodia elata223.250
SRR5643525five period of Gastrodia elata102.190
SRR5643528five period of Gastrodia elata65.670
SRR5643658five period of Gastrodia elata58.290
SRR5643659five period of Gastrodia elata70.340
SRR5643660five period of Gastrodia elata53.160
SRR5643661five period of Gastrodia elata64.840
SRR5643662five period of Gastrodia elata51.410
SRR5643663five period of Gastrodia elata57.120
SRR5643664five period of Gastrodia elata50.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_199.280
SRR6049655Rhizomagastrodiae_C368-T10_good_1183.240
SRR6049656Rhizomagastrodiae_C368-T07_good_1149.630
SRR6049657Rhizomagastrodiae_C368-T07_good_1122.640
SRR6049658Rhizomagastrodiae_C368-T04_good_199.760
SRR6049659Rhizomagastrodiae_C368-T04_good_184.080
SRR6049660Rhizomagastrodiae_C368-T01_good_190.470
SRR6049661Rhizomagastrodiae_C368-T04_good_1181.280
SRR6049662Rhizomagastrodiae_C368-T01_good_179.470
SRR6049663Rhizomagastrodiae_C368-T01_good_161.100
SRR6049664Rhizomagastrodiae_C368-T10_good_1157.670
SRR6049665Rhizomagastrodiae_C368-T10_good_1157.670
SRP279888GastroGastrodia elata tuber 63.89
JuvenJuvenile tuber63.20
Mother_GastroMother tuber of Gastrodia elata 140.08
Mother_JuvenMother tuber of Juvenile 113.69