Detail information of GWHGAAEX004294/evm.TU.scaffold_1472.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33156.00E-79Transport protein particle (TRAPP) complex subunit
nrgi|695061342|ref|XP_009419099.1|8.31E-79PREDICTED: trafficking protein particle complex subunit 5-like [Musa acuminata subsp. malaccensis]
trEMBLtr|M0U3V9|M0U3V9_MUSAM3.00E-79Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P27020_001}
TAIRAT5G580306.00E-79Transport protein particle (TRAPP) component

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000146424785602-
Transcript Sequence

Network for GWHGAAEX004294

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04051.15TRAPP41071.40E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0048193Biological ProcessGolgi vesicle transport
GO:0030008Cellular ComponentTRAPP complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.460
SRR2545915Juvenile tuber8.280
SRP108465SRR5643513five period of Gastrodia elata81.650
SRR5643514five period of Gastrodia elata75.360
SRR5643515five period of Gastrodia elata75.580
SRR5643524five period of Gastrodia elata72.460
SRR5643525five period of Gastrodia elata63.890
SRR5643528five period of Gastrodia elata47.030
SRR5643658five period of Gastrodia elata29.540
SRR5643659five period of Gastrodia elata98.290
SRR5643660five period of Gastrodia elata91.660
SRR5643661five period of Gastrodia elata82.060
SRR5643662five period of Gastrodia elata91.960
SRR5643663five period of Gastrodia elata99.250
SRR5643664five period of Gastrodia elata76.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.570
SRR6049655Rhizomagastrodiae_C368-T10_good_124.180
SRR6049656Rhizomagastrodiae_C368-T07_good_130.600
SRR6049657Rhizomagastrodiae_C368-T07_good_136.180
SRR6049658Rhizomagastrodiae_C368-T04_good_18.710
SRR6049659Rhizomagastrodiae_C368-T04_good_18.620
SRR6049660Rhizomagastrodiae_C368-T01_good_114.680
SRR6049661Rhizomagastrodiae_C368-T04_good_19.140
SRR6049662Rhizomagastrodiae_C368-T01_good_114.970
SRR6049663Rhizomagastrodiae_C368-T01_good_19.640
SRR6049664Rhizomagastrodiae_C368-T10_good_140.460
SRR6049665Rhizomagastrodiae_C368-T10_good_140.460
SRP279888GastroGastrodia elata tuber 45.72
JuvenJuvenile tuber55.89
Mother_GastroMother tuber of Gastrodia elata 31.94
Mother_JuvenMother tuber of Juvenile 47.70