Detail information of GWHGAAEX004306/evm.TU.scaffold_148.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743792622|ref|XP_010923730.1|3.31E-168PREDICTED: probable transcription factor PosF21 [Elaeis guineensis]
Swissprottr|Q6S4P4|RF2B_ORYSJ7.00E-51Transcription factor RF2b
trEMBLtr|A0A061DZL6|A0A061DZL6_THECC1.00E-148Basic-leucine zipper transcription factor family protein isoform 1 {ECO:0000313|EMBL:EOX97837.1}
TAIRAT4G389003.00E-110Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000147217815222744-
Transcript Sequence

Network for GWHGAAEX004306

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_13574151.80E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.760
SRR2545915Juvenile tuber11.750
SRP108465SRR5643513five period of Gastrodia elata10.090
SRR5643514five period of Gastrodia elata9.100
SRR5643515five period of Gastrodia elata9.650
SRR5643524five period of Gastrodia elata7.660
SRR5643525five period of Gastrodia elata12.370
SRR5643528five period of Gastrodia elata13.020
SRR5643658five period of Gastrodia elata11.750
SRR5643659five period of Gastrodia elata9.160
SRR5643660five period of Gastrodia elata9.590
SRR5643661five period of Gastrodia elata10.630
SRR5643662five period of Gastrodia elata11.840
SRR5643663five period of Gastrodia elata8.340
SRR5643664five period of Gastrodia elata11.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.350
SRR6049655Rhizomagastrodiae_C368-T10_good_128.540
SRR6049656Rhizomagastrodiae_C368-T07_good_115.070
SRR6049657Rhizomagastrodiae_C368-T07_good_113.380
SRR6049658Rhizomagastrodiae_C368-T04_good_112.570
SRR6049659Rhizomagastrodiae_C368-T04_good_113.620
SRR6049660Rhizomagastrodiae_C368-T01_good_112.000
SRR6049661Rhizomagastrodiae_C368-T04_good_112.690
SRR6049662Rhizomagastrodiae_C368-T01_good_111.630
SRR6049663Rhizomagastrodiae_C368-T01_good_112.160
SRR6049664Rhizomagastrodiae_C368-T10_good_117.690
SRR6049665Rhizomagastrodiae_C368-T10_good_117.690
SRP279888GastroGastrodia elata tuber 8.12
JuvenJuvenile tuber10.57
Mother_GastroMother tuber of Gastrodia elata 10.50
Mother_JuvenMother tuber of Juvenile 10.33