Detail information of GWHGAAEX004323/evm.TU.scaffold_148.34
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2288 | 0 | Galactosyltransferases |
| nr | gi|743887003|ref|XP_011038007.1| | 0 | PREDICTED: probable beta-1,3-galactosyltransferase 6 [Populus euphratica] |
| Swissprot | tr|Q9MAP8|B3GT6_ARATH | 0 | Probable beta-1,3-galactosyltransferase 6 |
| trEMBL | tr|B9RYW6|B9RYW6_RICCO | 0 | Beta-1,3-galactosyltransferase sqv-2, putative {ECO:0000313|EMBL:EEF43468.1} |
| TAIR | AT1G32930 | 0 | Galactosyltransferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000147 | 662560 | 678454 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004323
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13334.5 | DUF4094 | 20 | 109 | 2.80E-22 |
| PF01762.20 | Galactosyl_T | 149 | 345 | 1.70E-45 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006486 | Biological Process | protein glycosylation |
| GO:0008378 | Molecular Function | galactosyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.080 |
| SRR2545915 | Juvenile tuber | 2.730 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.020 |
| SRR5643514 | five period of Gastrodia elata | 5.790 | |
| SRR5643515 | five period of Gastrodia elata | 5.320 | |
| SRR5643524 | five period of Gastrodia elata | 4.740 | |
| SRR5643525 | five period of Gastrodia elata | 1.250 | |
| SRR5643528 | five period of Gastrodia elata | 1.640 | |
| SRR5643658 | five period of Gastrodia elata | 0.460 | |
| SRR5643659 | five period of Gastrodia elata | 11.430 | |
| SRR5643660 | five period of Gastrodia elata | 9.130 | |
| SRR5643661 | five period of Gastrodia elata | 11.450 | |
| SRR5643662 | five period of Gastrodia elata | 9.820 | |
| SRR5643663 | five period of Gastrodia elata | 12.440 | |
| SRR5643664 | five period of Gastrodia elata | 4.990 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.100 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.420 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.170 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.610 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.080 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.500 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.820 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2.820 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.310 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.990 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.040 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.040 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.99 |
| Juven | Juvenile tuber | 1.87 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.14 | |
| Mother_Juven | Mother tuber of Juvenile | 0.91 |