Detail information of GWHGAAEX004341/evm.TU.scaffold_148.55
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|32472094|ref|NP_865088.1| | 1.00E-16 | serine/threonine protein kinase [Rhodopirellula baltica SH 1] |
| KOG | KOG0610 | 0 | Putative serine/threonine protein kinase |
| nr | gi|743778522|ref|XP_010919725.1| | 0 | PREDICTED: serine/threonine-protein kinase D6PK-like [Elaeis guineensis] |
| Swissprot | tr|Q39183|D6KL2_ARATH | 0 | Serine/threonine-protein kinase D6PKL2 |
| trEMBL | tr|A5BR54|A5BR54_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN79227.1} |
| TAIR | AT2G44830 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000147 | 1125998 | 1134432 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004341
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 314 | 462 | 5.70E-36 |
| PF00069.24 | Pkinase | 551 | 654 | 2.80E-20 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | AGC_RSK-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 11.360 |
| SRR2545915 | Juvenile tuber | 14.790 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 10.000 |
| SRR5643514 | five period of Gastrodia elata | 10.160 | |
| SRR5643515 | five period of Gastrodia elata | 7.960 | |
| SRR5643524 | five period of Gastrodia elata | 8.710 | |
| SRR5643525 | five period of Gastrodia elata | 11.020 | |
| SRR5643528 | five period of Gastrodia elata | 6.190 | |
| SRR5643658 | five period of Gastrodia elata | 9.370 | |
| SRR5643659 | five period of Gastrodia elata | 9.400 | |
| SRR5643660 | five period of Gastrodia elata | 10.590 | |
| SRR5643661 | five period of Gastrodia elata | 8.730 | |
| SRR5643662 | five period of Gastrodia elata | 8.710 | |
| SRR5643663 | five period of Gastrodia elata | 8.680 | |
| SRR5643664 | five period of Gastrodia elata | 10.590 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 8.280 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 7.600 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 10.090 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.380 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.030 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.980 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 8.150 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.390 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 9.730 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 7.680 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 8.640 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 8.640 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.34 |
| Juven | Juvenile tuber | 10.14 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 6.62 | |
| Mother_Juven | Mother tuber of Juvenile | 6.20 |