Detail information of GWHGAAEX004353/evm.TU.scaffold_148.71
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|339484857|ref|YP_004696643.1| | 4.00E-25 | serine/threonine protein kinase [Nitrosomonas sp. Is79A3] |
| KOG | KOG1187 | 1.00E-135 | Serine/threonine protein kinase |
| nr | gi|672142034|ref|XP_008794867.1| | 0 | PREDICTED: probable receptor-like protein kinase At5g47070 [Phoenix dactylifera] |
| Swissprot | tr|Q9LTC0|Y5707_ARATH | 3.00E-136 | Probable receptor-like protein kinase At5g47070 |
| trEMBL | tr|M0SQY1|M0SQY1_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P21680_001} |
| TAIR | AT5G47070 | 1.00E-135 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000147 | 1547894 | 1560065 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004353
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 89 | 366 | 4.40E-46 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 22.070 |
| SRR2545915 | Juvenile tuber | 20.760 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 33.480 |
| SRR5643514 | five period of Gastrodia elata | 24.010 | |
| SRR5643515 | five period of Gastrodia elata | 40.530 | |
| SRR5643524 | five period of Gastrodia elata | 30.950 | |
| SRR5643525 | five period of Gastrodia elata | 23.120 | |
| SRR5643528 | five period of Gastrodia elata | 20.830 | |
| SRR5643658 | five period of Gastrodia elata | 19.680 | |
| SRR5643659 | five period of Gastrodia elata | 29.480 | |
| SRR5643660 | five period of Gastrodia elata | 22.170 | |
| SRR5643661 | five period of Gastrodia elata | 31.640 | |
| SRR5643662 | five period of Gastrodia elata | 35.760 | |
| SRR5643663 | five period of Gastrodia elata | 23.240 | |
| SRR5643664 | five period of Gastrodia elata | 30.280 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 21.320 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.240 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.390 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 22.520 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 20.420 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 21.870 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 26.860 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.880 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 27.310 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 27.080 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.260 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.260 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 22.86 |
| Juven | Juvenile tuber | 23.40 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 34.91 | |
| Mother_Juven | Mother tuber of Juvenile | 30.62 |