Detail information of GWHGAAEX004356/evm.TU.scaffold_148.74


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG11002.00E-44Predicted E3 ubiquitin ligase
nrgi|695003994|ref|XP_009388296.1|2.19E-65PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LDD1|BRG3_ARATH9.00E-20Probable BOI-related E3 ubiquitin-protein ligase 3
trEMBLtr|M0S916|M0S916_MUSAM8.00E-66Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P18250_001}
TAIRAT5G470502.00E-44SBP (S-ribonuclease binding protein) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014716338631635035-
Transcript Sequence

Network for GWHGAAEX004356

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.470
SRR2545915Juvenile tuber25.570
SRP108465SRR5643513five period of Gastrodia elata73.050
SRR5643514five period of Gastrodia elata41.220
SRR5643515five period of Gastrodia elata45.820
SRR5643524five period of Gastrodia elata45.560
SRR5643525five period of Gastrodia elata75.950
SRR5643528five period of Gastrodia elata89.280
SRR5643658five period of Gastrodia elata99.840
SRR5643659five period of Gastrodia elata48.910
SRR5643660five period of Gastrodia elata43.450
SRR5643661five period of Gastrodia elata57.270
SRR5643662five period of Gastrodia elata53.380
SRR5643663five period of Gastrodia elata51.170
SRR5643664five period of Gastrodia elata48.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_160.030
SRR6049655Rhizomagastrodiae_C368-T10_good_175.530
SRR6049656Rhizomagastrodiae_C368-T07_good_174.200
SRR6049657Rhizomagastrodiae_C368-T07_good_155.510
SRR6049658Rhizomagastrodiae_C368-T04_good_159.020
SRR6049659Rhizomagastrodiae_C368-T04_good_162.650
SRR6049660Rhizomagastrodiae_C368-T01_good_156.140
SRR6049661Rhizomagastrodiae_C368-T04_good_167.150
SRR6049662Rhizomagastrodiae_C368-T01_good_153.090
SRR6049663Rhizomagastrodiae_C368-T01_good_149.420
SRR6049664Rhizomagastrodiae_C368-T10_good_185.920
SRR6049665Rhizomagastrodiae_C368-T10_good_185.920
SRP279888GastroGastrodia elata tuber 67.13
JuvenJuvenile tuber20.53
Mother_GastroMother tuber of Gastrodia elata 252.64
Mother_JuvenMother tuber of Juvenile 170.94