Detail information of GWHGAAEX004373/evm.TU.scaffold_148.102


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00484.00E-79Transcription factor, Myb superfamily
nrgi|743879868|ref|XP_010908498.1|9.36E-94PREDICTED: transcription factor MYB39 [Elaeis guineensis]
Swissprottr|Q8GWP0|MYB39_ARATH4.00E-64Transcription factor MYB39
trEMBLtr|M0RUS3|M0RUS3_MUSAM1.00E-88Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P23430_001}
TAIRAT1G346704.00E-79myb domain protein 93

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014724869982488956-
Transcript Sequence

Network for GWHGAAEX004373

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14613.00E-16
PF00249.30Myb_DNA-binding671127.00E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.860
SRR2545915Juvenile tuber17.560
SRP108465SRR5643513five period of Gastrodia elata16.130
SRR5643514five period of Gastrodia elata36.140
SRR5643515five period of Gastrodia elata23.090
SRR5643524five period of Gastrodia elata35.100
SRR5643525five period of Gastrodia elata11.900
SRR5643528five period of Gastrodia elata4.060
SRR5643658five period of Gastrodia elata14.330
SRR5643659five period of Gastrodia elata2.540
SRR5643660five period of Gastrodia elata10.400
SRR5643661five period of Gastrodia elata3.950
SRR5643662five period of Gastrodia elata0.960
SRR5643663five period of Gastrodia elata0.550
SRR5643664five period of Gastrodia elata0.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.170
SRR6049655Rhizomagastrodiae_C368-T10_good_118.780
SRR6049656Rhizomagastrodiae_C368-T07_good_116.380
SRR6049657Rhizomagastrodiae_C368-T07_good_112.780
SRR6049658Rhizomagastrodiae_C368-T04_good_110.350
SRR6049659Rhizomagastrodiae_C368-T04_good_113.470
SRR6049660Rhizomagastrodiae_C368-T01_good_114.060
SRR6049661Rhizomagastrodiae_C368-T04_good_116.870
SRR6049662Rhizomagastrodiae_C368-T01_good_133.950
SRR6049663Rhizomagastrodiae_C368-T01_good_130.760
SRR6049664Rhizomagastrodiae_C368-T10_good_115.360
SRR6049665Rhizomagastrodiae_C368-T10_good_115.360
SRP279888GastroGastrodia elata tuber 1.99
JuvenJuvenile tuber2.90
Mother_GastroMother tuber of Gastrodia elata 266.08
Mother_JuvenMother tuber of Juvenile 261.75