Detail information of GWHGAAEX004374/evm.TU.scaffold_149.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743828903|ref|XP_010934000.1|1.81E-26PREDICTED: scarecrow-like protein 8 [Elaeis guineensis]
Swissprottr|Q9S7H5|SCL21_ARATH3.00E-16Scarecrow-like protein 21
trEMBLtr|M0SY10|M0SY10_MUSAM2.00E-24Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P12810_001}
TAIRAT2G048909.00E-16SCARECROW-like 21

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000146196976201147-
Transcript Sequence

Network for GWHGAAEX004374

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.13GRAS551503.00E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.950
SRR2545915Juvenile tuber3.210
SRP108465SRR5643513five period of Gastrodia elata2.440
SRR5643514five period of Gastrodia elata4.370
SRR5643515five period of Gastrodia elata1.250
SRR5643524five period of Gastrodia elata2.540
SRR5643525five period of Gastrodia elata0.620
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata7.330
SRR5643660five period of Gastrodia elata11.230
SRR5643661five period of Gastrodia elata6.920
SRR5643662five period of Gastrodia elata3.370
SRR5643663five period of Gastrodia elata10.740
SRR5643664five period of Gastrodia elata2.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.310
SRR6049655Rhizomagastrodiae_C368-T10_good_11.360
SRR6049656Rhizomagastrodiae_C368-T07_good_13.630
SRR6049657Rhizomagastrodiae_C368-T07_good_14.990
SRR6049658Rhizomagastrodiae_C368-T04_good_10.400
SRR6049659Rhizomagastrodiae_C368-T04_good_10.400
SRR6049660Rhizomagastrodiae_C368-T01_good_11.940
SRR6049661Rhizomagastrodiae_C368-T04_good_10.070
SRR6049662Rhizomagastrodiae_C368-T01_good_11.950
SRR6049663Rhizomagastrodiae_C368-T01_good_10.640
SRR6049664Rhizomagastrodiae_C368-T10_good_13.430
SRR6049665Rhizomagastrodiae_C368-T10_good_13.430
SRP279888GastroGastrodia elata tuber 2.48
JuvenJuvenile tuber98.42
Mother_GastroMother tuber of Gastrodia elata 7.39
Mother_JuvenMother tuber of Juvenile 22.02