Detail information of GWHGAAEX004381/evm.TU.scaffold_149.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743815289|ref|XP_010930297.1|0PREDICTED: FRIGIDA-like protein 3 [Elaeis guineensis]
Swissprottr|Q67ZB3|FRL3_ARATH2.00E-166FRIGIDA-like protein 3
trEMBLtr|M0TUK3|M0TUK3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P29000_001}
TAIRAT5G48390_11.00E-134Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000146740388775172+
Transcript Sequence

Network for GWHGAAEX004381

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07899.10Frigida1584513.60E-105
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms254.270
SRR2545915Juvenile tuber240.260
SRP108465SRR5643513five period of Gastrodia elata90.430
SRR5643514five period of Gastrodia elata74.540
SRR5643515five period of Gastrodia elata79.860
SRR5643524five period of Gastrodia elata76.460
SRR5643525five period of Gastrodia elata92.800
SRR5643528five period of Gastrodia elata75.670
SRR5643658five period of Gastrodia elata96.170
SRR5643659five period of Gastrodia elata134.700
SRR5643660five period of Gastrodia elata144.950
SRR5643661five period of Gastrodia elata129.890
SRR5643662five period of Gastrodia elata118.120
SRR5643663five period of Gastrodia elata135.350
SRR5643664five period of Gastrodia elata137.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1115.780
SRR6049655Rhizomagastrodiae_C368-T10_good_1106.270
SRR6049656Rhizomagastrodiae_C368-T07_good_185.160
SRR6049657Rhizomagastrodiae_C368-T07_good_1152.920
SRR6049658Rhizomagastrodiae_C368-T04_good_1120.070
SRR6049659Rhizomagastrodiae_C368-T04_good_1149.840
SRR6049660Rhizomagastrodiae_C368-T01_good_1114.740
SRR6049661Rhizomagastrodiae_C368-T04_good_1122.970
SRR6049662Rhizomagastrodiae_C368-T01_good_175.190
SRR6049663Rhizomagastrodiae_C368-T01_good_189.500
SRR6049664Rhizomagastrodiae_C368-T10_good_175.800
SRR6049665Rhizomagastrodiae_C368-T10_good_175.800
SRP279888GastroGastrodia elata tuber 118.58
JuvenJuvenile tuber156.34
Mother_GastroMother tuber of Gastrodia elata 82.69
Mother_JuvenMother tuber of Juvenile 125.97