Detail information of GWHGAAEX004392/evm.TU.scaffold_149.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743817365|ref|XP_010930914.1|2.61E-81PREDICTED: INO80 complex subunit D-like [Elaeis guineensis]
trEMBLtr|M0TWT6|M0TWT6_MUSAM3.00E-74Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P02290_001}
TAIRAT1G058601.00E-51Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014613213211340723+
Transcript Sequence

Network for GWHGAAEX004392

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13891.5zf-C3Hc3H1852453.10E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.870
SRR2545915Juvenile tuber8.620
SRP108465SRR5643513five period of Gastrodia elata12.530
SRR5643514five period of Gastrodia elata15.740
SRR5643515five period of Gastrodia elata14.270
SRR5643524five period of Gastrodia elata12.470
SRR5643525five period of Gastrodia elata26.790
SRR5643528five period of Gastrodia elata18.600
SRR5643658five period of Gastrodia elata22.660
SRR5643659five period of Gastrodia elata9.340
SRR5643660five period of Gastrodia elata9.360
SRR5643661five period of Gastrodia elata10.580
SRR5643662five period of Gastrodia elata12.760
SRR5643663five period of Gastrodia elata10.060
SRR5643664five period of Gastrodia elata10.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.250
SRR6049655Rhizomagastrodiae_C368-T10_good_19.470
SRR6049656Rhizomagastrodiae_C368-T07_good_113.360
SRR6049657Rhizomagastrodiae_C368-T07_good_19.360
SRR6049658Rhizomagastrodiae_C368-T04_good_115.100
SRR6049659Rhizomagastrodiae_C368-T04_good_114.700
SRR6049660Rhizomagastrodiae_C368-T01_good_111.500
SRR6049661Rhizomagastrodiae_C368-T04_good_114.850
SRR6049662Rhizomagastrodiae_C368-T01_good_115.220
SRR6049663Rhizomagastrodiae_C368-T01_good_113.430
SRR6049664Rhizomagastrodiae_C368-T10_good_114.770
SRR6049665Rhizomagastrodiae_C368-T10_good_114.770
SRP279888GastroGastrodia elata tuber 14.12
JuvenJuvenile tuber13.67
Mother_GastroMother tuber of Gastrodia elata 21.60
Mother_JuvenMother tuber of Juvenile 20.71