Detail information of GWHGAAEX004395/evm.TU.scaffold_149.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|269797914|ref|YP_003311814.1|1.00E-24serine/threonine protein kinase with PASTA sensor(s) [Veillonella parvula DSM 2008]
KOGKOG01920Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
nrgi|695047953|ref|XP_009411870.1|0PREDICTED: dual specificity protein kinase shkC-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q2MHE4|HT1_ARATH7.00E-38Serine/threonine-protein kinase HT1
trEMBLtr|F6HAY7|F6HAY7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB49412.1}
TAIRAT3G598300Integrin-linked protein kinase family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014618602041908865-
Transcript Sequence

Network for GWHGAAEX004395

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12796.6Ank_2781636.90E-11
PF07714.16Pkinase_Tyr2084503.60E-47
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-5

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0005515Molecular Functionprotein binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.750
SRR2545915Juvenile tuber29.380
SRP108465SRR5643513five period of Gastrodia elata23.050
SRR5643514five period of Gastrodia elata26.460
SRR5643515five period of Gastrodia elata25.190
SRR5643524five period of Gastrodia elata27.620
SRR5643525five period of Gastrodia elata41.710
SRR5643528five period of Gastrodia elata41.590
SRR5643658five period of Gastrodia elata36.200
SRR5643659five period of Gastrodia elata24.660
SRR5643660five period of Gastrodia elata21.340
SRR5643661five period of Gastrodia elata21.440
SRR5643662five period of Gastrodia elata21.220
SRR5643663five period of Gastrodia elata22.360
SRR5643664five period of Gastrodia elata16.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.990
SRR6049655Rhizomagastrodiae_C368-T10_good_127.240
SRR6049656Rhizomagastrodiae_C368-T07_good_124.010
SRR6049657Rhizomagastrodiae_C368-T07_good_126.700
SRR6049658Rhizomagastrodiae_C368-T04_good_124.700
SRR6049659Rhizomagastrodiae_C368-T04_good_125.350
SRR6049660Rhizomagastrodiae_C368-T01_good_122.980
SRR6049661Rhizomagastrodiae_C368-T04_good_120.880
SRR6049662Rhizomagastrodiae_C368-T01_good_122.310
SRR6049663Rhizomagastrodiae_C368-T01_good_124.610
SRR6049664Rhizomagastrodiae_C368-T10_good_131.000
SRR6049665Rhizomagastrodiae_C368-T10_good_131.000
SRP279888GastroGastrodia elata tuber 19.62
JuvenJuvenile tuber18.87
Mother_GastroMother tuber of Gastrodia elata 33.24
Mother_JuvenMother tuber of Juvenile 31.95