Detail information of GWHGAAEX004401/evm.TU.scaffold_15.2
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1716 | 1.00E-62 | Dual specificity phosphatase |
| nr | gi|743819419|ref|XP_010931522.1| | 0 | PREDICTED: dual specificity protein phosphatase 12-like [Elaeis guineensis] |
| Swissprot | tr|Q570P7|DUSL1_ARATH | 3.00E-44 | Probable inactive dual specificity protein phosphatase-like At4g18593 |
| trEMBL | tr|M0TJH6|M0TJH6_MUSAM | 4.00E-180 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P21390_001} |
| TAIR | HS6005956 | 1.00E-62 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000019 | 205945 | 215128 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004401
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00782.19 | DSPc | 90 | 182 | 7.70E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006470 | Biological Process | protein dephosphorylation |
| GO:0016311 | Biological Process | dephosphorylation |
| GO:0016791 | Molecular Function | phosphatase activity |
| GO:0004725 | Molecular Function | protein tyrosine phosphatase activity |
| GO:0008138 | Molecular Function | protein tyrosine/serine/threonine phosphatase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 26.610 |
| SRR2545915 | Juvenile tuber | 32.890 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 56.630 |
| SRR5643514 | five period of Gastrodia elata | 50.130 | |
| SRR5643515 | five period of Gastrodia elata | 63.930 | |
| SRR5643524 | five period of Gastrodia elata | 59.130 | |
| SRR5643525 | five period of Gastrodia elata | 42.680 | |
| SRR5643528 | five period of Gastrodia elata | 51.600 | |
| SRR5643658 | five period of Gastrodia elata | 43.070 | |
| SRR5643659 | five period of Gastrodia elata | 50.780 | |
| SRR5643660 | five period of Gastrodia elata | 60.320 | |
| SRR5643661 | five period of Gastrodia elata | 57.440 | |
| SRR5643662 | five period of Gastrodia elata | 45.350 | |
| SRR5643663 | five period of Gastrodia elata | 54.570 | |
| SRR5643664 | five period of Gastrodia elata | 34.820 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 32.430 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 34.420 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 34.040 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 31.850 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 29.610 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 28.460 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 27.120 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 29.220 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 40.060 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 37.930 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 52.600 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 52.600 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 45.91 |
| Juven | Juvenile tuber | 45.05 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 39.13 | |
| Mother_Juven | Mother tuber of Juvenile | 49.41 |