Detail information of GWHGAAEX004409/evm.TU.scaffold_15.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|344203110|ref|YP_004788253.1|6.00E-1196-phosphofructokinase [Muricauda ruestringensis DSM 13258]
KOGKOG24400Pyrophosphate-dependent phosphofructo-1-kinase
nrgi|672204885|ref|XP_008779034.1|0PREDICTED: ATP-dependent 6-phosphofructokinase 2-like, partial [Phoenix dactylifera]
Swissprottr|Q9FIK0|PFKA2_ARATH0ATP-dependent 6-phosphofructokinase 2 {ECO:0000255|HAMAP-Rule:MF_03186}
trEMBLtr|A0A067KKL4|A0A067KKL4_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP35553.1}
TAIRAT5G478100phosphofructokinase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000019325815328172+
Transcript Sequence

Network for GWHGAAEX004409

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00365.19PFK984057.30E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00850pfkA, PFK Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Methane metabolismmap00680
RNA degradationmap03018
HIF-1 signaling pathwaymap04066
AMPK signaling pathwaymap04152
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006002Biological Processfructose 6-phosphate metabolic process
GO:0006096Biological Processglycolytic process
GO:0005524Molecular FunctionATP binding
GO:0003872Molecular Function6-phosphofructokinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.270
SRR2545915Juvenile tuber16.620
SRP108465SRR5643513five period of Gastrodia elata27.370
SRR5643514five period of Gastrodia elata32.140
SRR5643515five period of Gastrodia elata28.610
SRR5643524five period of Gastrodia elata31.950
SRR5643525five period of Gastrodia elata28.300
SRR5643528five period of Gastrodia elata23.650
SRR5643658five period of Gastrodia elata29.740
SRR5643659five period of Gastrodia elata27.650
SRR5643660five period of Gastrodia elata24.980
SRR5643661five period of Gastrodia elata29.060
SRR5643662five period of Gastrodia elata24.860
SRR5643663five period of Gastrodia elata28.130
SRR5643664five period of Gastrodia elata29.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.500
SRR6049655Rhizomagastrodiae_C368-T10_good_135.840
SRR6049656Rhizomagastrodiae_C368-T07_good_130.910
SRR6049657Rhizomagastrodiae_C368-T07_good_131.370
SRR6049658Rhizomagastrodiae_C368-T04_good_128.820
SRR6049659Rhizomagastrodiae_C368-T04_good_132.510
SRR6049660Rhizomagastrodiae_C368-T01_good_128.910
SRR6049661Rhizomagastrodiae_C368-T04_good_129.100
SRR6049662Rhizomagastrodiae_C368-T01_good_130.960
SRR6049663Rhizomagastrodiae_C368-T01_good_129.210
SRR6049664Rhizomagastrodiae_C368-T10_good_132.130
SRR6049665Rhizomagastrodiae_C368-T10_good_132.130
SRP279888GastroGastrodia elata tuber 19.09
JuvenJuvenile tuber26.34
Mother_GastroMother tuber of Gastrodia elata 31.54
Mother_JuvenMother tuber of Juvenile 24.28