Detail information of GWHGAAEX004417/evm.TU.scaffold_15.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG48426.00E-125Protein involved in sister chromatid separation and/or segregation
nrgi|657394648|gb|KEH35222.1|8.29E-168zinc metalloproteinase-like protein, putative [Medicago truncatula]
trEMBLtr|A0A072V087|A0A072V087_MEDTR3.00E-168Zinc metalloproteinase-like protein, putative {ECO:0000313|EMBL:KEH35222.1}
TAIRAT5G356906.00E-125Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000019398058415497+
Transcript Sequence

Network for GWHGAAEX004417

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08325.9WLM1493234.90E-42
PF09409.9PUB4044685.70E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms67.250
SRR2545915Juvenile tuber59.540
SRP108465SRR5643513five period of Gastrodia elata46.220
SRR5643514five period of Gastrodia elata43.300
SRR5643515five period of Gastrodia elata40.900
SRR5643524five period of Gastrodia elata43.700
SRR5643525five period of Gastrodia elata48.420
SRR5643528five period of Gastrodia elata101.660
SRR5643658five period of Gastrodia elata61.540
SRR5643659five period of Gastrodia elata35.160
SRR5643660five period of Gastrodia elata38.960
SRR5643661five period of Gastrodia elata32.260
SRR5643662five period of Gastrodia elata33.640
SRR5643663five period of Gastrodia elata37.460
SRR5643664five period of Gastrodia elata36.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_144.660
SRR6049655Rhizomagastrodiae_C368-T10_good_145.340
SRR6049656Rhizomagastrodiae_C368-T07_good_137.860
SRR6049657Rhizomagastrodiae_C368-T07_good_150.460
SRR6049658Rhizomagastrodiae_C368-T04_good_145.550
SRR6049659Rhizomagastrodiae_C368-T04_good_153.150
SRR6049660Rhizomagastrodiae_C368-T01_good_144.410
SRR6049661Rhizomagastrodiae_C368-T04_good_143.330
SRR6049662Rhizomagastrodiae_C368-T01_good_134.230
SRR6049663Rhizomagastrodiae_C368-T01_good_135.550
SRR6049664Rhizomagastrodiae_C368-T10_good_137.950
SRR6049665Rhizomagastrodiae_C368-T10_good_137.950
SRP279888GastroGastrodia elata tuber 40.20
JuvenJuvenile tuber47.95
Mother_GastroMother tuber of Gastrodia elata 88.64
Mother_JuvenMother tuber of Juvenile 96.58