Detail information of GWHGAAEX004420/evm.TU.scaffold_15.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|18976913|ref|NP_578270.1|2.00E-51methionine aminopeptidase [Pyrococcus furiosus DSM 3638]
KOGKOG27750Metallopeptidase
nrgi|743884166|ref|XP_010909609.1|0PREDICTED: methionine aminopeptidase 2B-like isoform X2 [Elaeis guineensis]
Swissprottr|Q56Y85|MAP22_ARATH0Methionine aminopeptidase 2B {ECO:0000255|HAMAP-Rule:MF_03175}
trEMBLtr|M0T8C0|M0T8C0_MUSAM0Methionine aminopeptidase 2 {ECO:0000256|HAMAP-Rule:MF_03175}
TAIRAT3G599900methionine aminopeptidase 2B

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000019446322476490+
Transcript Sequence

Network for GWHGAAEX004420

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00557.23Peptidase_M241264232.70E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004177Molecular Functionaminopeptidase activity
GO:0008235Molecular Functionmetalloexopeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms189.850
SRR2545915Juvenile tuber162.130
SRP108465SRR5643513five period of Gastrodia elata98.080
SRR5643514five period of Gastrodia elata93.570
SRR5643515five period of Gastrodia elata99.000
SRR5643524five period of Gastrodia elata94.400
SRR5643525five period of Gastrodia elata76.090
SRR5643528five period of Gastrodia elata97.960
SRR5643658five period of Gastrodia elata76.640
SRR5643659five period of Gastrodia elata114.250
SRR5643660five period of Gastrodia elata125.030
SRR5643661five period of Gastrodia elata122.960
SRR5643662five period of Gastrodia elata115.660
SRR5643663five period of Gastrodia elata108.580
SRR5643664five period of Gastrodia elata114.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1106.910
SRR6049655Rhizomagastrodiae_C368-T10_good_1121.930
SRR6049656Rhizomagastrodiae_C368-T07_good_195.040
SRR6049657Rhizomagastrodiae_C368-T07_good_1131.180
SRR6049658Rhizomagastrodiae_C368-T04_good_1101.720
SRR6049659Rhizomagastrodiae_C368-T04_good_1142.720
SRR6049660Rhizomagastrodiae_C368-T01_good_1110.470
SRR6049661Rhizomagastrodiae_C368-T04_good_1110.900
SRR6049662Rhizomagastrodiae_C368-T01_good_191.980
SRR6049663Rhizomagastrodiae_C368-T01_good_193.000
SRR6049664Rhizomagastrodiae_C368-T10_good_1104.540
SRR6049665Rhizomagastrodiae_C368-T10_good_1104.540
SRP279888GastroGastrodia elata tuber 116.24
JuvenJuvenile tuber125.61
Mother_GastroMother tuber of Gastrodia elata 101.40
Mother_JuvenMother tuber of Juvenile 118.81