Detail information of GWHGAAEX004423/evm.TU.scaffold_15.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33367.00E-82Predicted member of the intramitochondrial sorting protein family
nrgi|743765832|ref|XP_010913143.1|1.94E-103PREDICTED: protein slowmo homolog 1 [Elaeis guineensis]
trEMBLtr|M0TTL5|M0TTL5_MUSAM1.00E-101Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P25620_001}
TAIRAT5G130707.00E-82MSF1-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000019494108494704-
Transcript Sequence

Network for GWHGAAEX004423

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04707.13PRELI161828.30E-37
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.730
SRR2545915Juvenile tuber15.120
SRP108465SRR5643513five period of Gastrodia elata31.600
SRR5643514five period of Gastrodia elata25.150
SRR5643515five period of Gastrodia elata34.950
SRR5643524five period of Gastrodia elata23.800
SRR5643525five period of Gastrodia elata49.430
SRR5643528five period of Gastrodia elata39.720
SRR5643658five period of Gastrodia elata24.090
SRR5643659five period of Gastrodia elata54.280
SRR5643660five period of Gastrodia elata46.100
SRR5643661five period of Gastrodia elata59.940
SRR5643662five period of Gastrodia elata46.170
SRR5643663five period of Gastrodia elata33.550
SRR5643664five period of Gastrodia elata35.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.010
SRR6049655Rhizomagastrodiae_C368-T10_good_172.040
SRR6049656Rhizomagastrodiae_C368-T07_good_136.780
SRR6049657Rhizomagastrodiae_C368-T07_good_125.490
SRR6049658Rhizomagastrodiae_C368-T04_good_125.830
SRR6049659Rhizomagastrodiae_C368-T04_good_117.530
SRR6049660Rhizomagastrodiae_C368-T01_good_126.810
SRR6049661Rhizomagastrodiae_C368-T04_good_121.130
SRR6049662Rhizomagastrodiae_C368-T01_good_128.420
SRR6049663Rhizomagastrodiae_C368-T01_good_131.390
SRR6049664Rhizomagastrodiae_C368-T10_good_146.130
SRR6049665Rhizomagastrodiae_C368-T10_good_146.130
SRP279888GastroGastrodia elata tuber 37.57
JuvenJuvenile tuber46.20
Mother_GastroMother tuber of Gastrodia elata 86.33
Mother_JuvenMother tuber of Juvenile 63.90