Detail information of GWHGAAEX004432/evm.TU.scaffold_15.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428317996|ref|YP_007115878.1|2.00E-33Transcription factor jumonji [Oscillatoria nigro-viridis PCC 7112]
KOGKOG21323.00E-176Uncharacterized conserved protein, contains JmjC domain
nrgi|672143713|ref|XP_008795735.1|0PREDICTED: lysine-specific demethylase 8 isoform X1 [Phoenix dactylifera]
Swissprottr|Q8RWR1|JMJ30_ARATH2.00E-173Putative lysine-specific demethylase JMJD5
trEMBLtr|M0TTL2|M0TTL2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P25590_001}
TAIRAT3G208103.00E-1762-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000019618881641600+
Transcript Sequence

Network for GWHGAAEX004432

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13621.5Cupin_81874094.00E-50
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.110
SRR2545915Juvenile tuber12.160
SRP108465SRR5643513five period of Gastrodia elata11.170
SRR5643514five period of Gastrodia elata7.010
SRR5643515five period of Gastrodia elata8.790
SRR5643524five period of Gastrodia elata7.350
SRR5643525five period of Gastrodia elata12.110
SRR5643528five period of Gastrodia elata12.350
SRR5643658five period of Gastrodia elata12.720
SRR5643659five period of Gastrodia elata13.240
SRR5643660five period of Gastrodia elata12.820
SRR5643661five period of Gastrodia elata11.750
SRR5643662five period of Gastrodia elata12.390
SRR5643663five period of Gastrodia elata12.550
SRR5643664five period of Gastrodia elata13.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.780
SRR6049655Rhizomagastrodiae_C368-T10_good_116.250
SRR6049656Rhizomagastrodiae_C368-T07_good_113.240
SRR6049657Rhizomagastrodiae_C368-T07_good_125.130
SRR6049658Rhizomagastrodiae_C368-T04_good_117.290
SRR6049659Rhizomagastrodiae_C368-T04_good_120.480
SRR6049660Rhizomagastrodiae_C368-T01_good_117.260
SRR6049661Rhizomagastrodiae_C368-T04_good_114.860
SRR6049662Rhizomagastrodiae_C368-T01_good_110.140
SRR6049663Rhizomagastrodiae_C368-T01_good_110.190
SRR6049664Rhizomagastrodiae_C368-T10_good_19.600
SRR6049665Rhizomagastrodiae_C368-T10_good_19.600
SRP279888GastroGastrodia elata tuber 10.32
JuvenJuvenile tuber34.02
Mother_GastroMother tuber of Gastrodia elata 10.38
Mother_JuvenMother tuber of Juvenile 25.22