Gene detail

Detail information of GWHGAAEX004442/evm.TU.scaffold_15.50

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|334338216\|ref\|YP_004543368.1\|	5.00E-12	chaperone DnaJ domain-containing protein [Isoptericola variabilis 225]
nr	gi\|743768251\|ref\|XP_010914403.1\|	0	PREDICTED: uncharacterized protein LOC105039818 [Elaeis guineensis]
Swissprot	tr\|Q9FH28\|DNJ49_ARATH	3.00E-11	Chaperone protein dnaJ 49
trEMBL	tr\|V4RGA1\|V4RGA1_9ROSI	0	Uncharacterized protein {ECO:0000313\|EMBL:ESR32933.1}
TAIR	AT5G18750	3.00E-95	DNAJ heat shock N-terminal domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000019	730481	733384	+

Transcript Sequence
>GWHTAAEX004442 ATGGAGTGCAACAAGGAGGAGGCTATCAGAGCCAAGAACTTTGCTGAGACTAGGATGAAGAGCCAAGACTTCGAAGGGGCACAAAAGATTGCACTGAAGGCACGAAGTCTCTTTCCTGATCTTGAGGGAATCTCTCAGATCTTAACTGTGTGCGAGGTACATTGTGCTGCAGGAACAAAGATAGGTGGGGAGACTGACTGGTACGCGGTCCTTCAAGTAGAGATGATGGCGGATGATTCAACCATCAGGAAACAATACCGGAAGTTTGCCCTCCAGCTTCATCCCGATAAAAACAAGCTTGCCGGCGCTGAAACTGCTTTCCAGCTGGTTGGAGATGCGTATAAGATCCTATCAGACCCTAAAAAACGCTCCCAGTACAATGTAATCAGGAGAACAAATTTCTGCAGTGTGTCACTCAATCAAGCTGCTCGGCAGTCTTACAGACCTTCCGGGAGGAAGCAGCCGGGGCCCGGAGTTTCGAGCGTGGCGGCTAAGTCAACATTTGTTAATTTTGGTGGCTCGAATCAGAATCAGCCGTCCCCATTCTTGGGTGTCTCGACATTTTGGGCCACGTGTCCTTCCTGTAATGTAGGGCTCCAATTCTATCACAATACATTAAGCAAGCACGTTCAGTGCCAAAAATGCTTTAATGTATTTGCTGCAAATGAACTGAAGACACAAGGCATGAGTAGCGCAGGAAGTTCAGCAAAAGCTGTTAGTGGTGCTGAGTTTCAGAAGCCTAAATTCAATGATTCAGCATTCAAACAAAGGTCTAGGCCTGAATACAGTTCTGGATCTAAAAACGACGTACAAGATAGAAAGATGAATGACTTTTCGGCTAAGATTAATGATGAAAAAATTCAAAATGCACAATTTCAGTCGATTCGTAGTAGACAACAAGAAGCCAACACTCCAGCTAGTCAGACGAGAAGAAATGAGGAAAGTAAAACTCAGAAACTGAACGATGAGAAAGACTCCAATCTCCTACGAAGGTCCGCCAGGAACAAACGAAATGCTTCTGTTGAATCTTTGTCATCTGCTTCCAAAAGGTTGAAACAAGGCGAAAAACGGGCCAATGGGGTGCCAAATGATACTGCCTTTCCTGGAGAAACAGAAGAAAATGGGAAGAGAAGCATCTCTTCAGAGCTTAATAATGCAAGTGCAGCAGACTCAAGTAGCAAGGCCTCAGTTGATCAAGAAAACCTGACATACCCTGCTCCCGTGTTTTGTAACTTTGAAAGTGCTAGATCTGAGAATAAGTTTGCTGTTGGTCAAGTATGGGCCATATATGATAACATCGACGGGATGCCCAGATATTATGCACGCGTGAAAAAGGTCTACAGCCGGGAGTTCAAGCTCCAGTTAACCTGGCTAGAAAACGACCCTAAAAGCATCACTGAGATGCAGTGGACCCAGCAGGGCTTGCCAATCGTTTGCGGGAACTTTAAACACGGGAAATTATACAATACACAAGAGAGGCACATCTTCTCTCATCTTGTTCAATGGAGATTGGGGACAAAGAGAAATTCATATGTTATATATCCACAGAGAGGAGAGATATGGGCCTTGTTCAAGAACTGGAATATTGGATGGAGCTTTAAGCCTGATAATCACAGAACCTACGAATATCAAATCGTCGAGGTTGTCTCTGATTTCTCAGAAGCAGCTGGGATCAGCGTTGTGCGTCTTGCCAGGATAAAGGAGTTTTTGGCTTTGTTTATAAGAGCAAATGACGCTGAAGAAAGCTTGCTTGAGATACCAGCGAAAGATGTGCTCATTTTTTCGCACAGGATTCCTGCATGCAGAATTATCGATAAAAAGGAAGAAGGCGTGCCGGAGTGCGCATATGAACTCGATTGTGCTTCTTTACCCAGGAAGTTTGAAGCAATCTTCCCTTCCATCAGTCTAAAAGGTACTAAAAACGTGGCGCCAAATGTTGAATTTTCTCAATCCACTGCAGCCGAGAATGGGTTTAAACCCATCTGGCAAAATGCAATAGAAAAATCGGAGTCAGGAAGCAAAAGCTCTGAATTCAGCAAGATTAGTGGAACTTCTGAGACTATGTTTGTAAACTCGAATGGAAGCCAGGAGAATGCTTCCGCAGTGCTGCAGAAGTTATCAGAGAGTAAAAACATGAAATTGAGGAGCGATGTTAGCCCTGAAGCAGATAACATAGGTTCTTCTCAGAAGTCTGAAAACCCTGAGCATCCAAGCCTGATCGCTTTTGAATACCCTGAATCGGAATTCTACAACTTTGAAGATGACCGGTTGATGGTGAAGTTTGAATGCGGCCAGGTGTGGGCATTTTATTGCGAAATAGATAACTTTCCGAAATATTATGGAAAGATAAGGCGAGTTGATCGGGAAAATAATCGAGTGAATGTGCGGTGGCTAGAGTCTTACTCTGCATTGGGAGCAAATGAAGGCGGCGCCGAAGACAGGCCGCTTCTTGCCTGCGGCTCTTTCAGAGCCACGAAGGAGACAAGCACAATGGATTCAGGTGAAACATTCTCGCATCAGGCGAATGCAAAACCGACGGCAGAAAAGAACCATTTTTACATATTTCCTGATGTCGGGGAGGTCTGGGCAGTGTTTAGAAACCGGAGCGCCACTTGTTCTTCTTCTTCCTCTTCGGACCACCAAGGCTATGAATTTGAAGTGGTGGAAATAATATCATCCCGCACCGCTTCCAAAATCGAAGCTCTTTTGCTTGCTAAGGTTGACGGTCATGTGAGTGTTTTCCGTCGCAAAAAGCGAGGCCCTGATGCGGTAATGTTAATTCCCTTTTCCGAGCTGTCGAGGTTTTCCCATCGGATTCCGGCATACAGACTGGAGAGAGAAATGGGTGGTGCGGGCTACTGGGAGTTGGATCCGGCGGCCGTGCCCGCTGCTTTTCTGAGTTGA

Network for GWHGAAEX004442

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	66	127	4.10E-21
PF11926.7	DUF3444	400	605	2.00E-71
PF11926.7	DUF3444	742	947	1.70E-55

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	18.120
SRP064423	SRR2545915	Juvenile tuber	14.820
SRP108465	SRR5643513	five period of Gastrodia elata	12.950
	SRR5643514	five period of Gastrodia elata	11.890
	SRR5643515	five period of Gastrodia elata	11.860
	SRR5643524	five period of Gastrodia elata	12.360
	SRR5643525	five period of Gastrodia elata	13.780
	SRR5643528	five period of Gastrodia elata	11.290
	SRR5643658	five period of Gastrodia elata	11.370
	SRR5643659	five period of Gastrodia elata	14.750
	SRR5643660	five period of Gastrodia elata	14.180
	SRR5643661	five period of Gastrodia elata	14.320
	SRR5643662	five period of Gastrodia elata	15.740
	SRR5643663	five period of Gastrodia elata	14.350
	SRR5643664	five period of Gastrodia elata	15.280
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.480
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.340
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.950
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	16.760
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	14.310
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	18.410
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.240
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.590
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	14.640
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.120
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.120
SRP279888	Gastro	Gastrodia elata tuber	10.86
	Juven	Juvenile tuber	12.18
	Mother_Gastro	Mother tuber of Gastrodia elata	9.85
	Mother_Juven	Mother tuber of Juvenile	9.97