Gene detail

Detail information of GWHGAAEX004450/evm.TU.scaffold_15.57

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743867460\|ref\|XP_010905321.1\|	0	PREDICTED: LOW QUALITY PROTEIN: ubinuclein-1-like [Elaeis guineensis]
trEMBL	tr\|M0TVL1\|M0TVL1_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P32590_001}
TAIR	AT1G21610	4.00E-64	wound-responsive family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000019	925462	984546	-

Transcript Sequence
>GWHTAAEX004450 AAAAATTAACTATTTCCACGGGTTCCGGGTTTCAACTTTCATCGAAGGCTTGGGCCGCAGGAGTATCGTCATATTCTCCGTCGTCGGGACCGCCCCTCCTCTCATGGATTCCGCCAGCAATTGCTCCCCTCTCTAACACTTGAGGCCATACCAGGGTTCCTTCATCTCGCCTGCTTTAAAGAAGGCTAAAGTTTCATTCTCGTTTCCCTCTAAAAATCAGATATGGAGGAGGAAAAGGGCGGTACCGGAACTTCATTAAAAATTTCGCAGCCCCTTTTATCAGCCGATCCATCTACCGCTTCTCCTCCTCTGCCTCAACCGGCCCATGCTCTGGTTCCAGCTCCTGCACCGGCCAAAAATCCTCCAAAGGAAGCGGAGGCCGCAGGGCAACGACAGATGTTCACTGTGGAGTTGCGGCGGGGAGAGACTACCATTGTTTCTTGGAAGAAGCTTCTTAGGGAGTCTGGTTCTGGAAACGGGGAAGCGTCATCTTTTATTACTCGTAATCCGATGCCTGATACCCGCCCAGTTGCTGGGGTTCATCCAAGGGAAGATGATTTAAAACATACAATACAGCCTCAAAATTGCTTCAGTGCTGTTATTGAAAAGATTGAAAGATTGTACATGGGTAGGGAAAGCAGCGACGAGGAAGAGCTTGATGCACCTGATGATGATCAATATGATACCGAGGACTCTTTTATTGATGACACTGAATTGGATGAGTACTTTCAAGTTGACAAATTATCAACAAAGCACAATGGGTATTTTGTGAACAGGGGAAAGCTGGAATGGGTTGAACCAAGTTCCTCACCTAATTTGGCCCCAAAGAAAAGAAAGAGAAGAGAATCAACAAAAGAGCCAAATGAAACTGATCATGAGCGTGTTTTAAATGAACATGTCAGCACGGGTATTATGAAGATCAAAGCTGCTGCAAGAAATGCTCCCCTTGTGGCAAGGAAATTGTCTCCTACTGAAGCTATGCCTTCTTATGAAGAACATTATCAAGAAGGAAAGCTTCTGAAAGCAAAACCAAATTCTTCCGCAGCCATATACAGGAAACGCCCTGCAGACTCTGCCATAAAATTGGATTTTTCTCCACCCACAAGATTGCAAAATAACGAGTATTCATCAGTTTTAATAGAATCAAAGGAAAATAACAAGAGAAATTTTTTCTCACCCAAAGGTCTTCATAAATCCAGCACCGCTACAGAATCATTTGGTACAACAATTCAAGCATCTAGGGAGAAAGCTGGTGGTTCTCAAGCTGAACAACTATCAAAGAAAGTATTCAATGCTAATAAGGAAATCGAAGTGTCAGCCAAAATGCAACGAAAAGAAAAGCATGTTTATGGTGATTATCCCCAAAATTCCTCTATGGCTCCCTATCCTACACAAGGAGTAAAGCATCCCTTTCCCCATCGGGTTAGGGAGGGTACTTTAAGACCCAAGGGCACCACAATGGAGCGAGCTATTCGTGACCTGGAAAAGATAGTTGAACTGTGCAGACCGTTGGAGCCTGGAGTTCAAGAAGTTGATCCTTCCGCTCAAGGCATTAAAAGGAGATTACCTCAAGAAGTAAAGCAAAAGCTAGCTAAAGTTGCTAGATTATCGGCAAGCCAAAGTAAAATATCGGAAGAAGAGTTAATTAATCGCCTCATGGGTTTTCTTGGCCATTTGGTACAAAGGAAGACTTTGAAGAGAAACATGAGAGAGATGGTTGAACTAGGTCTATCTGCAAAGCAGCAGAAAGCTGATAAACTCTTGCAAATTAAAAAGGAGGTTCTTGAAATGATAAAAGCACGTGTATCACTTCTGAAGGTGCCTGAACAACAAGATGCTTTAACTGACGATTTTCAGGATGTGGTTAGTACTGATGAAAAGAGAGTTTTACGAGGAAGATATTGTATGGATGCAGCATTGGAAGACAAAATTTGTGATCTCTATGATTTGCATGTTGAGGGGATGGATGAAGACAAGGGGCCTCAAAGCCGAAAGCTGTATGTAGAGCTTGCAGAGCTGTGGCCTGCTGGTTATATGGATAATTTTGGGATCAAAGATGCAATTTACAGGGCTAAGAAACGTAGACGGCATAAGCTCCAGTCTCGTGGTGAAGAGAGGATCTTCGAGAGGAAGAATACTGCTGCTGCAGCAGCAGCAATGAAGCCAGAGGAAGCTCCCGCTCCTGAAAAGCAGATTCCAAACCTAAATCCCCTTCTCCAAAGCAGAATTCTTGATCGAGGAAACGGCGGCGGAATTAGAGCGTCGCCGGCAGCAGATGCTGCGAAGAAGAGGGCGGCCAAAATGGCTAAGGAAAAACTGATCCATAGGTCCGGCAACGATTCCGCCACGACCCGCCCTCCGCCACCGAGGGCCGTCGAAATCCCGGCGGCTGCTCCTCCGCCCTTCGATCAACCGAGCTGATCATCGTCCGCTGTTTTGTTCTGTGTACATATATATGCCGCAAAAGCAGAAAAAGCAGGAGCCCATTTTTTTTGGTCCTTCGATTCTTTAGAGGCTTGTTCGATTCGGTCTTCTGTCAGACTTTTTATTTAAATGCTCAAAACAGTTGGTTTTAATTTTGATATTTACAAAATTAACACCTAATCAAATGGGGTAATTATATTATGTAATTAGAGTGATAATTTTGTAATATTTCAAATATAGCGGTTTAAATCAGAGAAGTTGAAGATCAACTGTTTGAGCATTTTATTCCTTCTCTCTCGTCTTGAATTGAATAACTCTAAAGAATCAAATATATATTGGGCAGGATATTGTTCAGAAGGCCTTTTGTAGAGCCATCAGTCATATGGGGGCCCACTCACTGATATCCTTCATTTTTTTTCAAGACTACGACATTACCCTTCTCTTTGCTCCTTTAGATATCTCAGCATTTAAATTTATAATATTAGAGATTCACTACCTA

Network for GWHGAAEX004450

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF08729.9	HUN	147	189	2.10E-14

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	20.130
SRP064423	SRR2545915	Juvenile tuber	16.580
SRP108465	SRR5643513	five period of Gastrodia elata	13.510
	SRR5643514	five period of Gastrodia elata	11.630
	SRR5643515	five period of Gastrodia elata	11.560
	SRR5643524	five period of Gastrodia elata	11.880
	SRR5643525	five period of Gastrodia elata	12.280
	SRR5643528	five period of Gastrodia elata	11.290
	SRR5643658	five period of Gastrodia elata	11.700
	SRR5643659	five period of Gastrodia elata	10.440
	SRR5643660	five period of Gastrodia elata	11.010
	SRR5643661	five period of Gastrodia elata	11.700
	SRR5643662	five period of Gastrodia elata	11.530
	SRR5643663	five period of Gastrodia elata	10.680
	SRR5643664	five period of Gastrodia elata	11.020
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.290
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	17.120
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.580
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.330
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	16.680
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	21.200
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.740
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	16.860
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.910
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	13.760
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.790
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.790
SRP279888	Gastro	Gastrodia elata tuber	11.98
	Juven	Juvenile tuber	26.14
	Mother_Gastro	Mother tuber of Gastrodia elata	18.26
	Mother_Juven	Mother tuber of Juvenile	24.58