Detail information of GWHGAAEX004459/evm.TU.scaffold_15.69
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|159897428|ref|YP_001543675.1| | 4.00E-25 | serine/threonine protein kinase [Herpetosiphon aurantiacus DSM 785] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|743890295|ref|XP_010911042.1| | 0 | PREDICTED: serine/threonine-protein kinase CDL1-like [Elaeis guineensis] |
| Swissprot | tr|Q0WRY5|CDL1_ARATH | 0 | Serine/threonine-protein kinase CDL1 {ECO:0000305} |
| trEMBL | tr|M0T796|M0T796_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P15480_001} |
| TAIR | AT5G02800 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000019 | 1241716 | 1248183 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004459
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 80 | 346 | 4.30E-46 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.080 |
| SRR2545915 | Juvenile tuber | 14.530 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 20.590 |
| SRR5643514 | five period of Gastrodia elata | 22.260 | |
| SRR5643515 | five period of Gastrodia elata | 19.920 | |
| SRR5643524 | five period of Gastrodia elata | 23.900 | |
| SRR5643525 | five period of Gastrodia elata | 26.600 | |
| SRR5643528 | five period of Gastrodia elata | 23.830 | |
| SRR5643658 | five period of Gastrodia elata | 32.340 | |
| SRR5643659 | five period of Gastrodia elata | 11.670 | |
| SRR5643660 | five period of Gastrodia elata | 11.460 | |
| SRR5643661 | five period of Gastrodia elata | 12.980 | |
| SRR5643662 | five period of Gastrodia elata | 14.390 | |
| SRR5643663 | five period of Gastrodia elata | 10.700 | |
| SRR5643664 | five period of Gastrodia elata | 11.830 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 16.810 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 27.110 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.620 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 16.940 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 17.150 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.670 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.260 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.190 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 17.200 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 17.270 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 24.030 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 24.030 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 13.83 |
| Juven | Juvenile tuber | 17.79 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 32.83 | |
| Mother_Juven | Mother tuber of Juvenile | 20.44 |