Detail information of GWHGAAEX004463/evm.TU.scaffold_15.73


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|22298033|ref|NP_681280.1|0cysteine desulfurase [Thermosynechococcus elongatus BP-1]
nrgi|672112340|ref|XP_008805252.1|0PREDICTED: UPF0051 protein in atpA 3'region-like [Phoenix dactylifera]
Swissprottr|Q9ZS97|AB8I_ARATH0UPF0051 protein ABCI8, chloroplastic (Precursor)
trEMBLtr|F2CRG4|F2CRG4_HORVD0Predicted protein {ECO:0000313|EMBL:BAJ85435.1}
TAIRAT4G047700ATP binding cassette protein 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001912766861301623+
Transcript Sequence

Network for GWHGAAEX004463

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01458.16UPF00512815148.90E-65
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016226Biological Processiron-sulfur cluster assembly

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.030
SRR2545915Juvenile tuber29.470
SRP108465SRR5643513five period of Gastrodia elata30.860
SRR5643514five period of Gastrodia elata29.340
SRR5643515five period of Gastrodia elata31.480
SRR5643524five period of Gastrodia elata30.890
SRR5643525five period of Gastrodia elata50.100
SRR5643528five period of Gastrodia elata51.040
SRR5643658five period of Gastrodia elata62.750
SRR5643659five period of Gastrodia elata32.110
SRR5643660five period of Gastrodia elata29.020
SRR5643661five period of Gastrodia elata28.140
SRR5643662five period of Gastrodia elata34.810
SRR5643663five period of Gastrodia elata34.460
SRR5643664five period of Gastrodia elata36.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.750
SRR6049655Rhizomagastrodiae_C368-T10_good_160.130
SRR6049656Rhizomagastrodiae_C368-T07_good_132.910
SRR6049657Rhizomagastrodiae_C368-T07_good_132.350
SRR6049658Rhizomagastrodiae_C368-T04_good_128.970
SRR6049659Rhizomagastrodiae_C368-T04_good_131.980
SRR6049660Rhizomagastrodiae_C368-T01_good_131.760
SRR6049661Rhizomagastrodiae_C368-T04_good_128.100
SRR6049662Rhizomagastrodiae_C368-T01_good_127.740
SRR6049663Rhizomagastrodiae_C368-T01_good_125.430
SRR6049664Rhizomagastrodiae_C368-T10_good_132.290
SRR6049665Rhizomagastrodiae_C368-T10_good_132.290
SRP279888GastroGastrodia elata tuber 34.57
JuvenJuvenile tuber39.30
Mother_GastroMother tuber of Gastrodia elata 46.50
Mother_JuvenMother tuber of Juvenile 56.64