Detail information of GWHGAAEX004467/evm.TU.scaffold_15.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743880098|ref|XP_010908560.1|4.96E-53PREDICTED: transcription factor bHLH51-like [Elaeis guineensis]
Swissprottr|Q9XEF0|BH051_ARATH5.00E-30Transcription factor bHLH51
trEMBLtr|M7Z428|M7Z428_TRIUA2.00E-44Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_21807-P1}
TAIRAT2G402002.00E-29basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001913902631392428-
Transcript Sequence

Network for GWHGAAEX004467

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH12582.10E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.530
SRR2545915Juvenile tuber2.040
SRP108465SRR5643513five period of Gastrodia elata33.570
SRR5643514five period of Gastrodia elata6.980
SRR5643515five period of Gastrodia elata9.940
SRR5643524five period of Gastrodia elata9.680
SRR5643525five period of Gastrodia elata7.750
SRR5643528five period of Gastrodia elata7.260
SRR5643658five period of Gastrodia elata2.900
SRR5643659five period of Gastrodia elata10.380
SRR5643660five period of Gastrodia elata8.750
SRR5643661five period of Gastrodia elata4.940
SRR5643662five period of Gastrodia elata6.430
SRR5643663five period of Gastrodia elata8.120
SRR5643664five period of Gastrodia elata4.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.090
SRR6049655Rhizomagastrodiae_C368-T10_good_117.340
SRR6049656Rhizomagastrodiae_C368-T07_good_121.890
SRR6049657Rhizomagastrodiae_C368-T07_good_156.930
SRR6049658Rhizomagastrodiae_C368-T04_good_1181.930
SRR6049659Rhizomagastrodiae_C368-T04_good_1221.010
SRR6049660Rhizomagastrodiae_C368-T01_good_152.050
SRR6049661Rhizomagastrodiae_C368-T04_good_1120.310
SRR6049662Rhizomagastrodiae_C368-T01_good_119.800
SRR6049663Rhizomagastrodiae_C368-T01_good_120.890
SRR6049664Rhizomagastrodiae_C368-T10_good_115.580
SRR6049665Rhizomagastrodiae_C368-T10_good_115.580
SRP279888GastroGastrodia elata tuber 8.07
JuvenJuvenile tuber17.66
Mother_GastroMother tuber of Gastrodia elata 25.93
Mother_JuvenMother tuber of Juvenile 12.24