Detail information of GWHGAAEX004474/evm.TU.scaffold_15.85


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|407452652|ref|YP_006724377.1|0Asparagine synthase (glutamine-hydrolyzing) [Riemerella anatipestifer RA-CH-1]
KOGKOG05710Asparagine synthase (glutamine-hydrolyzing)
nrgi|743788074|ref|XP_010922574.1|0PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Elaeis guineensis]
Swissprottr|P31752|ASNS_ASPOF0Asparagine synthetase [glutamine-hydrolyzing]
trEMBLtr|B3TLZ2|B3TLZ2_ELAGV0Asparagine synthetase {ECO:0000256|PIRNR:PIRNR001589}
TAIRAT3G473400glutamine-dependent asparagine synthase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001915089421514507+
Transcript Sequence

Network for GWHGAAEX004474

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13537.5GATase_7481657.90E-40
PF00733.20Asn_synthase2103616.90E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01953asnB, ASNS Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0006529Biological Processasparagine biosynthetic process
GO:0004066Molecular Functionasparagine synthase (glutamine-hydrolyzing) activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.490
SRR2545915Juvenile tuber139.120
SRP108465SRR5643513five period of Gastrodia elata158.200
SRR5643514five period of Gastrodia elata64.060
SRR5643515five period of Gastrodia elata156.760
SRR5643524five period of Gastrodia elata63.820
SRR5643525five period of Gastrodia elata87.050
SRR5643528five period of Gastrodia elata214.700
SRR5643658five period of Gastrodia elata414.220
SRR5643659five period of Gastrodia elata19.800
SRR5643660five period of Gastrodia elata14.870
SRR5643661five period of Gastrodia elata8.470
SRR5643662five period of Gastrodia elata7.980
SRR5643663five period of Gastrodia elata7.010
SRR5643664five period of Gastrodia elata8.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1277.300
SRR6049655Rhizomagastrodiae_C368-T10_good_1350.210
SRR6049656Rhizomagastrodiae_C368-T07_good_1221.760
SRR6049657Rhizomagastrodiae_C368-T07_good_1218.440
SRR6049658Rhizomagastrodiae_C368-T04_good_1157.990
SRR6049659Rhizomagastrodiae_C368-T04_good_1195.760
SRR6049660Rhizomagastrodiae_C368-T01_good_1122.720
SRR6049661Rhizomagastrodiae_C368-T04_good_1127.060
SRR6049662Rhizomagastrodiae_C368-T01_good_1108.080
SRR6049663Rhizomagastrodiae_C368-T01_good_1120.890
SRR6049664Rhizomagastrodiae_C368-T10_good_1240.390
SRR6049665Rhizomagastrodiae_C368-T10_good_1240.390
SRP279888GastroGastrodia elata tuber 21.75
JuvenJuvenile tuber135.77
Mother_GastroMother tuber of Gastrodia elata 175.68
Mother_JuvenMother tuber of Juvenile 66.33