Detail information of GWHGAAEX004482/evm.TU.scaffold_15.94


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743788344|ref|XP_010922640.1|1.97E-51PREDICTED: dehydration-responsive element-binding protein 2B-like isoform X1 [Elaeis guineensis]
Swissprottr|A2WL19|DRE2A_ORYSI3.00E-45Dehydration-responsive element-binding protein 2A
trEMBLtr|Q4W3B2|Q4W3B2_FESAR3.00E-48Putative DREB2A protein {ECO:0000313|EMBL:CAG30547.1}
TAIRAT2G403508.00E-39Integrase-type DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001916977441698475+
Transcript Sequence

Network for GWHGAAEX004482

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP2681161.00E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.140
SRR2545915Juvenile tuber11.410
SRP108465SRR5643513five period of Gastrodia elata18.550
SRR5643514five period of Gastrodia elata18.100
SRR5643515five period of Gastrodia elata15.860
SRR5643524five period of Gastrodia elata20.080
SRR5643525five period of Gastrodia elata54.360
SRR5643528five period of Gastrodia elata30.370
SRR5643658five period of Gastrodia elata24.370
SRR5643659five period of Gastrodia elata7.370
SRR5643660five period of Gastrodia elata10.150
SRR5643661five period of Gastrodia elata10.300
SRR5643662five period of Gastrodia elata20.710
SRR5643663five period of Gastrodia elata13.280
SRR5643664five period of Gastrodia elata66.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.750
SRR6049655Rhizomagastrodiae_C368-T10_good_110.150
SRR6049656Rhizomagastrodiae_C368-T07_good_114.090
SRR6049657Rhizomagastrodiae_C368-T07_good_116.480
SRR6049658Rhizomagastrodiae_C368-T04_good_120.480
SRR6049659Rhizomagastrodiae_C368-T04_good_131.340
SRR6049660Rhizomagastrodiae_C368-T01_good_116.970
SRR6049661Rhizomagastrodiae_C368-T04_good_117.410
SRR6049662Rhizomagastrodiae_C368-T01_good_115.460
SRR6049663Rhizomagastrodiae_C368-T01_good_119.120
SRR6049664Rhizomagastrodiae_C368-T10_good_116.970
SRR6049665Rhizomagastrodiae_C368-T10_good_116.970
SRP279888GastroGastrodia elata tuber 27.09
JuvenJuvenile tuber11.77
Mother_GastroMother tuber of Gastrodia elata 75.34
Mother_JuvenMother tuber of Juvenile 51.72