Detail information of GWHGAAEX004496/evm.TU.scaffold_15.109


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|338733041|ref|YP_004671514.1|4.00E-09hypothetical protein SNE_A11460 [Simkania negevensis Z]
KOGKOG17165.00E-128Dual specificity phosphatase
nrgi|672136983|ref|XP_008792198.1|1.96E-132PREDICTED: phosphoglucan phosphatase LSF2, chloroplastic [Phoenix dactylifera]
Swissprottr|Q9SRK5|LSF2_ARATH2.00E-128Phosphoglucan phosphatase LSF2, chloroplastic (Precursor)
trEMBLtr|A0A061FZ34|A0A061FZ34_THECC9.00E-130Dual specificity protein phosphatase (DsPTP1) family protein isoform 1 {ECO:0000313|EMBL:EOY20064.1}
TAIRAT3G109405.00E-128dual specificity protein phosphatase (DsPTP1) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001919252051955313+
Transcript Sequence

Network for GWHGAAEX004496

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00782.19DSPc1272304.60E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006470Biological Processprotein dephosphorylation
GO:0016311Biological Processdephosphorylation
GO:0016791Molecular Functionphosphatase activity
GO:0008138Molecular Functionprotein tyrosine/serine/threonine phosphatase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms84.820
SRR2545915Juvenile tuber72.340
SRP108465SRR5643513five period of Gastrodia elata25.740
SRR5643514five period of Gastrodia elata27.640
SRR5643515five period of Gastrodia elata25.540
SRR5643524five period of Gastrodia elata28.910
SRR5643525five period of Gastrodia elata28.150
SRR5643528five period of Gastrodia elata25.260
SRR5643658five period of Gastrodia elata22.770
SRR5643659five period of Gastrodia elata24.400
SRR5643660five period of Gastrodia elata27.890
SRR5643661five period of Gastrodia elata25.340
SRR5643662five period of Gastrodia elata26.020
SRR5643663five period of Gastrodia elata28.430
SRR5643664five period of Gastrodia elata27.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.300
SRR6049655Rhizomagastrodiae_C368-T10_good_128.140
SRR6049656Rhizomagastrodiae_C368-T07_good_148.640
SRR6049657Rhizomagastrodiae_C368-T07_good_142.480
SRR6049658Rhizomagastrodiae_C368-T04_good_146.880
SRR6049659Rhizomagastrodiae_C368-T04_good_147.620
SRR6049660Rhizomagastrodiae_C368-T01_good_142.520
SRR6049661Rhizomagastrodiae_C368-T04_good_145.160
SRR6049662Rhizomagastrodiae_C368-T01_good_145.120
SRR6049663Rhizomagastrodiae_C368-T01_good_145.470
SRR6049664Rhizomagastrodiae_C368-T10_good_140.490
SRR6049665Rhizomagastrodiae_C368-T10_good_140.490
SRP279888GastroGastrodia elata tuber 37.45
JuvenJuvenile tuber19.07
Mother_GastroMother tuber of Gastrodia elata 30.43
Mother_JuvenMother tuber of Juvenile 23.30