Detail information of GWHGAAEX004504/evm.TU.scaffold_15.120
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|170782224|ref|YP_001710557.1| | 2.00E-21 | serine/threonine-protein kinase [Clavibacter michiganensis subsp. sepedonicus] |
| KOG | KOG0584 | 0 | Serine/threonine protein kinase |
| nr | gi|672157711|ref|XP_008798574.1| | 0 | PREDICTED: LOW QUALITY PROTEIN: probable serine/threonine-protein kinase WNK5 [Phoenix dactylifera] |
| Swissprot | tr|Q9SCU5|WNK5_ARATH | 0 | Probable serine/threonine-protein kinase WNK5 |
| trEMBL | tr|M0TJP8|M0TJP8_MUSAM | 0 | Potassium transporter {ECO:0000256|RuleBase:RU321113} |
| TAIR | AT3G51630 | 0 | with no lysine (K) kinase 5 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000019 | 2284081 | 2290701 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004504
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 24 | 279 | 2.60E-45 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | WNK_NRBP |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 203.220 |
| SRR2545915 | Juvenile tuber | 108.470 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 72.310 |
| SRR5643514 | five period of Gastrodia elata | 48.660 | |
| SRR5643515 | five period of Gastrodia elata | 53.860 | |
| SRR5643524 | five period of Gastrodia elata | 37.240 | |
| SRR5643525 | five period of Gastrodia elata | 162.030 | |
| SRR5643528 | five period of Gastrodia elata | 203.870 | |
| SRR5643658 | five period of Gastrodia elata | 202.380 | |
| SRR5643659 | five period of Gastrodia elata | 86.510 | |
| SRR5643660 | five period of Gastrodia elata | 108.910 | |
| SRR5643661 | five period of Gastrodia elata | 86.820 | |
| SRR5643662 | five period of Gastrodia elata | 58.690 | |
| SRR5643663 | five period of Gastrodia elata | 83.520 | |
| SRR5643664 | five period of Gastrodia elata | 88.410 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 101.470 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 75.110 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 81.650 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 115.170 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 131.760 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 154.410 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 114.730 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 106.240 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 55.230 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 95.640 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 76.500 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 76.500 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 92.69 |
| Juven | Juvenile tuber | 69.87 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 228.19 | |
| Mother_Juven | Mother tuber of Juvenile | 166.28 |