Detail information of GWHGAAEX004506/evm.TU.scaffold_15.123


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15827418|ref|NP_301681.1|2.00E-07serine-threonine protein kinase [Mycobacterium leprae TN]
KOGKOG11875.00E-171Serine/threonine protein kinase
nrgi|743788739|ref|XP_010922742.1|0PREDICTED: probable receptor-like protein kinase At3g55450 [Elaeis guineensis]
Swissprottr|Q8GXZ3|Y5102_ARATH3.00E-54Serine/threonine-protein kinase At5g01020
trEMBLtr|A0A061EHG2|A0A061EHG2_THECC0Kinase superfamily protein isoform 1 {ECO:0000313|EMBL:EOY04460.1}
TAIRAT3G087605.00E-171Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001924205212429275+
Transcript Sequence

Network for GWHGAAEX004506

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr2114471.30E-25
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-II

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms55.430
SRR2545915Juvenile tuber65.710
SRP108465SRR5643513five period of Gastrodia elata30.450
SRR5643514five period of Gastrodia elata25.980
SRR5643515five period of Gastrodia elata40.640
SRR5643524five period of Gastrodia elata32.640
SRR5643525five period of Gastrodia elata21.880
SRR5643528five period of Gastrodia elata30.420
SRR5643658five period of Gastrodia elata30.930
SRR5643659five period of Gastrodia elata28.110
SRR5643660five period of Gastrodia elata25.030
SRR5643661five period of Gastrodia elata32.180
SRR5643662five period of Gastrodia elata26.520
SRR5643663five period of Gastrodia elata21.030
SRR5643664five period of Gastrodia elata25.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.530
SRR6049655Rhizomagastrodiae_C368-T10_good_134.510
SRR6049656Rhizomagastrodiae_C368-T07_good_129.150
SRR6049657Rhizomagastrodiae_C368-T07_good_143.850
SRR6049658Rhizomagastrodiae_C368-T04_good_136.830
SRR6049659Rhizomagastrodiae_C368-T04_good_149.380
SRR6049660Rhizomagastrodiae_C368-T01_good_142.430
SRR6049661Rhizomagastrodiae_C368-T04_good_132.550
SRR6049662Rhizomagastrodiae_C368-T01_good_128.310
SRR6049663Rhizomagastrodiae_C368-T01_good_131.000
SRR6049664Rhizomagastrodiae_C368-T10_good_121.400
SRR6049665Rhizomagastrodiae_C368-T10_good_121.400
SRP279888GastroGastrodia elata tuber 18.60
JuvenJuvenile tuber23.13
Mother_GastroMother tuber of Gastrodia elata 33.94
Mother_JuvenMother tuber of Juvenile 28.11