Gene detail

Detail information of GWHGAAEX004539/evm.TU.scaffold_15.168

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743819116\|ref\|XP_010931429.1\|	0	PREDICTED: probable galacturonosyltransferase 7 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q9ZVI7\|GAUT7_ARATH	2.00E-168	Probable galacturonosyltransferase 7
trEMBL	tr\|K4A6Z3\|K4A6Z3_SETIT	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Si034649m}
TAIR	AT2G38650	9.00E-165	galacturonosyltransferase 7

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000019	3336313	3356865	+

Transcript Sequence
>GWHTAAEX004539 CATCCCAAAATGCCCTAAAGATCTATCTCACGTCTACCTGTCCGTTCATCAGCTCGTTTCCTCCTGTGATTTCTATGTCTGTGATCCAGAAAAGGCCCGTCGAGGAAGAGAGAGCTGCCGAAACGGAGTGAGACATTTTGTTAGAAGAGAAGGCGAATGAGCTCCTAGCAGGCCTCCATGGAGATGCAAGAGAGATTGCTCTTTTCTGATCGTTCTAGGTAATACCATACCTAATCGGGAAAAGGCCAGCTGAAGAGATGAAAAGCTATGCGGCGTCGACGGGGTCTGCTACGAAGCAGAGGCGATGGAAATGGCTTGCTCTCGCTGTTCTCGCGCTCGTTTTCTTTTCTATGTTCGTCCCGCTCGCCTTCCTTCTCGGCCTGTACAACGGCTTCCCCGTCGGATACTTGAGTGAGGAGAGCCCACCATCGAACTTTTTTGACATTCACGGTCACGGTGGTGTTGCAGAGAGGAATGCATCCGAGGTAATTGTCAAAGGCGCAGATGGAGATGGAGATATGAATTTAAACAATTCCAAACAAGTTGCAGTCGGTGAACAGCATATCTCAAAATTTACAAGCGGTGTGTCCCACTCACGATCAGAAATGATGGCTACAGTTTTATCTGTTTTTTCCGGTATTGATTCAGAAGGTCCTTCAATTCTGAATCCAAAGTTTGATAGCAGAGTAGGAGTTAAGCTTTCTGATAGTTCAAATTATGTTGGAGCTCAGAAAACGTGTGAACTTGAATTTGGGACTTACTGTCTTTGGTCCAAAGAGCACAAGGAGGCAATGAAAGACATTATAATCAAAAGACTTAAAGATCAGCTTTTTGTTTCCAGGGCTTATTATCCAAGCATTGCCAAACTTCTGGGACATGAGACACTATCGCATGAGATGAAACAGAATATTCAAGAACATGAGCGCATGCTCAGTGAAGCCACTTCAGATACGGATCTTCCACCATTCGTTCCAAAGAAAATTAAACAGATGAAAGCGTCGATCGCAAAAGCCAAAGCGTGCACCGTGGAATGCAGTAATGTTGAGAGGAAACTGAGACAGATTCTTGATCTGACTGAGGAGGAGACTCATTTCCACATGAAGCAGAGCGCATTCCTGTATCATCTCGTGGTCCAAAGTATGCCTAAAAGTTTGCACTGTTTGTCAATGAGATTAACGATGGAGTACTTTCAAGAGGGGTCTCCATCAGACACTGATATTTCTCATTTCTACAAGTTTAATAACCCGAAGTTCCGGCACTATGTTATATTTTCTCGTGACGTGCTAGCTGTATCTGTCACCGTCAACTCTACCGTCATGAGTTCCAAGGACACTGCCGATATAGTTTTCCATCTGATAACCGATCGGCAAAATTTCTACGCTATGAAGTTCTGGTTCGCCAGGCATTTTTACATGGAGGCTACCATCCGCGTCGTGAACATAGAAGATCTCTATCCGGGAATGCAGCTCTCACCATCCGAAGAATTCCGTATCTCAGTTCACGATATCGATCACCCTCATTCATTGCATATGAGAACGGAGTACGTGTCGGTTTTTGGCCACTCACACTTTCTTCTCCCTGAAATATTCAAGGATCTGAAGAAGCTGATCGTCCTGGATGACGATATGATCGTCCAGCAGGATTTGACGCATCTTTGGAACACCGATCTAGCGGGTAAAGTCAATGGCGCCGTCAGTTTCTGCCGGCTGCGGCTAGGAGATCTCAAAGCATTTTTGGGAAGAAATAGCATTCATGACTGCAGCCTTTGCCTTTGGACATCTGGACTGAATGTTATTCACCTGGAAAATTGGAGGCAGCACAATCTCACTGGAACATATCTAGAGCTTCTCGGCACGATTTTAGAGGAAAAATGCCAACGCCTAGAGCTGGCGCGACATTTCATCTGCACAAGTTTTTGTCGTGTTCTACAGCTTCATAATGGGAGTGAAGGAGGTGCGACGCTTCCTGCAAGCTTGTTGGTGTTCCAGGGCCATGTGTTTCCACTTGACGGCTCCTCGGTTATCATATCGGGGCTCGGCCATGAATACGGTGTTGATGAAGAGGCAATAAAGAGCGCGACCGCTCTTCATTATAACGGTAACATGAAGCCTTGGCTTGACTTAGGCATTCCTGAGTACAAAAAGTATTGGAAGAAGTTCCTAGCTTGGGGGCCCGACCGGTTTATGGATGAATGCAATGTCTCGCACTAAGAAAATGCGAAGGCACTTGTGCTGTTTGATCTTCATGGGAGAGGTTTTGTTGAGGAAGAATAACTGCAAGAAGATTTGTTTTCAATGTTGGGATACTGAAGGGGTCGGGAAAATTTGGAGAGTCATATTTGTGAGTTATTGTTATTCTTAAATAATTTTTTTGAGTAAAGCCGGAGCTGCTGCTGCTGCTGATTCAAGGGGGCGGCCGGGCGCTGACGCCGCTTCTTGCATTAAATGATGCTGGCTAGCGGAGATGCTGAAGTTTGATTAACTAGTTCATTTGTGATGTATATCATTTGATTAGTTTTAGATTGGCACCATTGAATGGGTTGGTGCCATTGTAATTGGAACCAATGTAGATTTATTTTTCCTTATTTTAGTTTTGTTTATTTGTGGCTTATTATTTATTTTCTTTAGTTCCTAGTGTCAATTCTTTGTCAATTTCCACACATTGAATGGAGCTCTGATATTGCAATGGTGATGCCTTCGCTGATTTCTACTTCATCACCATAGTGCTGTTTGTGCTTTTGAAAAGAAATACAAATTTTG

Network for GWHGAAEX004539

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01501.19	Glyco_transf_8	301	622	4.10E-36

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13648	GAUT	Metabolic pathways	map01100
K13648	GAUT	Amino sugar and nucleotide sugar metabolism	map00520

Gene Ontology

GO term	Ontology	Name
GO:0016757	Molecular Function	transferase activity, transferring glycosyl groups

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	20.140
SRP064423	SRR2545915	Juvenile tuber	21.190
SRP108465	SRR5643513	five period of Gastrodia elata	18.330
	SRR5643514	five period of Gastrodia elata	16.910
	SRR5643515	five period of Gastrodia elata	19.150
	SRR5643524	five period of Gastrodia elata	15.410
	SRR5643525	five period of Gastrodia elata	34.340
	SRR5643528	five period of Gastrodia elata	23.920
	SRR5643658	five period of Gastrodia elata	34.380
	SRR5643659	five period of Gastrodia elata	20.480
	SRR5643660	five period of Gastrodia elata	18.070
	SRR5643661	five period of Gastrodia elata	16.670
	SRR5643662	five period of Gastrodia elata	23.200
	SRR5643663	five period of Gastrodia elata	20.610
	SRR5643664	five period of Gastrodia elata	17.710
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	19.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.980
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.050
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	22.510
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	22.440
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.010
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	22.230
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	23.250
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	21.650
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.480
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.090
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.090
SRP279888	Gastro	Gastrodia elata tuber	19.51
	Juven	Juvenile tuber	21.30
	Mother_Gastro	Mother tuber of Gastrodia elata	18.98
	Mother_Juven	Mother tuber of Juvenile	28.73