Detail information of GWHGAAEX004544/CADD00379.2.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31046.00E-54Mod5 protein sorting/negative effector of RNA Pol III synthesis
nrgi|743782875|ref|XP_010921263.1|7.11E-67PREDICTED: repressor of RNA polymerase III transcription MAF1 homolog [Elaeis guineensis]
trEMBLtr|M0SD73|M0SD73_MUSAM3.00E-64Repressor of RNA polymerase III transcription MAF1 {ECO:0000256|PIRNR:PIRNR037240}
TAIRAT5G132406.00E-54transcription regulators

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001934440493475980-
Transcript Sequence

Network for GWHGAAEX004544

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09174.9Maf11192245.20E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0016480Biological Processnegative regulation of transcription from RNA polymerase III promoter

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms65.100
SRR2545915Juvenile tuber50.150
SRP108465SRR5643513five period of Gastrodia elata24.940
SRR5643514five period of Gastrodia elata24.780
SRR5643515five period of Gastrodia elata23.340
SRR5643524five period of Gastrodia elata18.310
SRR5643525five period of Gastrodia elata36.960
SRR5643528five period of Gastrodia elata32.900
SRR5643658five period of Gastrodia elata40.400
SRR5643659five period of Gastrodia elata19.490
SRR5643660five period of Gastrodia elata33.360
SRR5643661five period of Gastrodia elata26.490
SRR5643662five period of Gastrodia elata26.150
SRR5643663five period of Gastrodia elata24.680
SRR5643664five period of Gastrodia elata31.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.710
SRR6049655Rhizomagastrodiae_C368-T10_good_129.370
SRR6049656Rhizomagastrodiae_C368-T07_good_123.230
SRR6049657Rhizomagastrodiae_C368-T07_good_126.700
SRR6049658Rhizomagastrodiae_C368-T04_good_132.290
SRR6049659Rhizomagastrodiae_C368-T04_good_126.280
SRR6049660Rhizomagastrodiae_C368-T01_good_121.860
SRR6049661Rhizomagastrodiae_C368-T04_good_126.630
SRR6049662Rhizomagastrodiae_C368-T01_good_115.500
SRR6049663Rhizomagastrodiae_C368-T01_good_120.200
SRR6049664Rhizomagastrodiae_C368-T10_good_127.520
SRR6049665Rhizomagastrodiae_C368-T10_good_127.520
SRP279888GastroGastrodia elata tuber 47.48
JuvenJuvenile tuber54.76
Mother_GastroMother tuber of Gastrodia elata 40.59
Mother_JuvenMother tuber of Juvenile 45.17