Gene detail

Detail information of GWHGAAEX004546/evm.TU.scaffold_15.176

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1820	Microtubule-associated protein
nr	gi\|743789169\|ref\|XP_010922855.1\|	PREDICTED: protein MOR1-like [Elaeis guineensis]
Swissprot	tr\|Q5N749\|MOR1_ORYSJ	Protein MOR1
trEMBL	tr\|M0U9Z6\|M0U9Z6_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP17370_001}
TAIR	AT2G35630	ARM repeat superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000019	3500711	3550043	+

Transcript Sequence
>GWHTAAEX004546 ATGTCTACGGAGGAGGAAAGGCTGTTAAAGGAGGCGAAGAAGCTTCCATGGGAGGAGCGTCTGTTTCATAAGAATTGGAAAGTCAGGAACGAGGCTAACATTGACCTTGCCGCTGTATGCGACTCCATCACGGATCCCAGGGATCTCCGTCTCAGAGAGTTTGGTTCGTTTTTTAAGAAGACAGTGGCCGACTCAAATGCTCCTGTGCAGGAGAAGGCTTTAGATGCTCTTATTGCGTTTTTGAAGGCCGCAGATGCCGATGCAGGAAGGTTTGCAAAGGAAGTCTGTGACGCCATTGCGGCTAAATGTCTTACGGGGCGGCCCAAGACTGTGGAGAAAGCTCAGTCAGTTTTTTTACTATGGGTTGAGCTGGAAGCAGCGGAGGTTTTTTTGGAATCCATGGAGAAAGCAATAAAAAATAAAGTAGCAAAAGCAGTTGTGCCTGCTATTGATGTCATGTTTCAAGCCCTCAGTGAGTTTGGTGCAAAAGTTGTTCCCCCAAAAAAGATATTGAAAATGCTTCCGGAACTATTTGATCACCAAGATCAGAATGTTCGTGCATCTTCTAAAGGTCTGACACTTGAACTTTGTCGCTGGATTGGGAAAGAACCAGTGAAATCTATTCTTTTTGAGAAAATGCGTGACACTATGAAAAAAGAACTGGAGGCTGAACTTCCTAATGTTACAGGGTCCTCTAAGCCAACCCGCAAAATAAGATCTGAGCAAGATAAGGAACCAGAATTTGAAACTGTTACTGAAATTACAGGCAATGGTGTATCTGATGATTCAGTGGCTGATGTCCCTCAGGATATAGATGAGTATGAGCTTGTTGATCCTGTTGATATTTTGACTCCGTTGGAAAAATCTGGATTTTGGGACGGTGTGAAAGCTACTAAATGGTCAGAAAGAAGAGATGCAGTGGCAGAACTTACCAAATTAGCTTCAACGAAAAGAATTGCTCCTGGTGATTTTACTGAAATTTGTAGGACTCTCAAAAAGCTTGCTACTGATGTGAACCTTGCTGTTTCCGTAGAGGCCATTCAAGCAATTGGAAATCTAGCTCGAGGTTTGAGAACACATTTTGCTGGGAGCTCACGCATTCTTTTGCCTGTTCTATTGGAGAAGTTGAAGGAGAAGAAACCAACTTTGACAGATGCTCTAACTCAGACTCTTCAGGCGTTGCACAAGGCTGGATGCTTGACACTTCCAGACATCATTGAAGGCAAGTACTATATAAAGGTGGCAGTGAAAAATAAAGTGCCACTTGTGCGCTCGCTAACCCTTAACTGGGTAACCTTTTGCATAGAAACAAGTAATAAAGCAGCTGTGCTTAAGTTACATAAAGATTATGTTCCTATTTGCATGGAGTGCCTGAATGATGGTACCCCAGAAGTTCGAGACGCATCTTTTTCTGCTTTAGCAGCTATAGCGAAGATGGTTGGCATGCGACCATTAGAAAGGTCATTGGAAAAATTAGATGATGTGAGGAAGAAGAAACTTTCTGAAATGATCAGTGATGGTACTAATGTATTGAGTACAGGATCAGTTGGTCCTGTTTCAACTTCAAGTATTACAGTGGCTGGTCAGGTGGCTACTGATACCTCGTTTGTAAGGAGGTCTGCAGCAAGCATGCTTAGTGGAAAGAGGCCAGTGCAAGCAGTGTCGACTACCAAAAAAAGTGGCCCTACAAAGGCTGGAATAGTAAAAAAGACTGACGGAGTTGCTCCATCAAAAGTTTCATTGCCAGTTGGGTCTGATGACGCTGAGCCCGGAGAGATGTCTTTGGAAGAAATTGAACAAAGATTGTGTTCTGATATCAAAACTGATACGGTCATGCAATTAAAGAGTAGTGTTTGGAAGGAGCGCCTAGAAGCTATTGGTTTGCTGAAAGAGCAGGTTGAAAACATTGGAGAGCTGGATTCAATTGCTGAGTTGTTGATTCGTCTCTTATGTGCTGTTCCTGGTTGGGCTGAAAAAAATGTGCAGGTCCAGCAGCAGGTCATTGATGTGATAACGTATGTAGCTTCAACCGCTAAGCGTTTCCCCAAAAGATGTGTGGTACTTTGCCTTCTAGGCATAAGTGAAAGGGTAGCGGATATCAAAACTCGTGCTCATGGAATGAAATGCCTTACGACTTTTTCTGAAGCTGTTGGTCCAGGGTTTATTTTTGATAGGCTTTACAAAATTTTGAAAGATCATAAAAACCCTAAGGTTCTTAGTGAGGGTTTATTGTGGATGGTCTCAGCATTGGAAGATTTTGGTATTTCTTATATAAAGCTGAAGGATCTAATTGATTTTTGTAAAGAAATCGGACTGCAATCTAGTGCTGCTGCAACAAGAAACTCTACTATCAAGCTTATAGGAGTGTTACATCGGTTTGTTGGTCCAGATATTAAAGGCTTTTTATCTGATATTAAGCCCGCACTTCTCAGTACCCTTGAGGCAGAGTGTGAAAAGAATCCATTTGAGGGTAATGCTGTAGCCCCAAAGAAAATAGTTAAAACTTTTGATTCTACATCGTCATTACCCCCTGGATTTGATGGTCTACCACAAGAAGACATTAGTGCGAAGATAACTCCTAATCTTCTTAAAAATTTTAGTAGCCCAGATTGGAAGGTGCGTCTGGAATCTATTGAGTCAGTCAACAAAATACTTGAAGAAGCCCATAAACGCATTCAACCTGCTGGAACTCCGGAGTTATTTGCAGCTCTAAGAGGCCGCCTATACGATAGTAACAAAAATTTGGCTATGGCAACATTAACAACTATAGGTGGTATTGCATCTGCTATGGGTCTTCCAGTTGAGAAGTCCAGCAAGGGCATTCTGGCAGATGTGTTAAAATGTCTTGGAGATAACAAAAAGCACATGAGGGAGTGCACGTTGAATACTTTAGATTCATGGATTGGAGCTGTCCAACTGGATAAAATGGTTCCATACATAATTGTTGCTTTGGCAGATCCAAAAATAGGTTCTGATGGACGTAAAGACATATTCGATTGGTTGTCTAGGCATCTTTCAAGTATCAATGACTCACCTGATGCTGTACACCTACTGAAACCAACTGCCTCTGCTATAATGGAAAAATCAGTAGATGTTAGAAAAGCAGCAGAAACTACTCTCTGTGATATCATGAGAGTTTGCGGTCAAGAAGCAGTGTCAAAGACTTTAAAAGACTTGCGAGGACCTGTTTTGTCCCTTGTACTTGAACGGTTGAAACTTCCAGCCATGATCCAAGATGTTATGGATTCTACAAAGACTGTTCCTTCTGTGTTAACTACGAAGAATAGTTCAAAGATTGGAAAACCTGGTTCAAATGGTGCTATTGATCGAGGATCCAAGAATACAAATAAGGCTGTACCTATGAGGGGGGTACCCACAAGAACCTCAAAATCAGAATATATGTTTTCTGCTCAAGATATAGCACTGCAATCACAGGCTATTTTGAATGTCAAGGACTCTAACAAGGAGGATAGAGAAAGAATGGTTATACGTAGATTTAAATTTGAGGACCCTAGACCTGAGCAGATTCAAGATCTTGAGTGTGATATTATGAAGCATTTTAGAGAAGACCTTCATAAGAGATTTCTTAGCACTGACTTCAAGAAGCAAGTAGAAGGGATCGATTTGTTGCAAAAGGCCCTACCATCTTGTGTAAAAGAGATGATTGAACTTGTTGATATACTTCTAAGATGGTTTGTTTTACGGTTTTGTGAGTCCAACACAACATGCTTATTGAAGGTTCTGGAATTTCTTCCTGATTTTGTTGATGCTTTGAAGGATGAGGGTTACAGTTTAACTGAGGCTGAAGCAGCAACGTTTCTTCCATGTCTCTTAGAGAAGTCTGGGCATAACATTGAGAAGGTAAGGGAGAAAATGAGAGAATTGTTGAAGCAGATTGTTTGTATTTATTCTGCATCAAAGCTTCTTCCATACATTCTTCAAGGTTTGTCATCAAAAAATAGTCGAACTAAAATAGAATGTGTGGACCTTATCGGCTGGCTGATTGAGCATAACGGAGCTGAGATCAGTGGACAGTTGAAATCTTTGCAACATGTTGCTGCTTTAACCTCAGAAAGAGATGGTGAAATCAGGAAAGCTTCTCTAAATACAATGGCTACTGCCTATAAGTCTCTTGGAGATGAGGTTTGGAAATATGTTGGAAAATTATCAGACGCCCAAAGAAGCATGCTAGATGATCGATTTAAATGGAAGGCTAGGGAGATGGAAAAGAGGAAAGAAGGAAAACCTGGTGAAGGTAGAGGAGCACTGAGACGAACTGTTAGAGAAAATGGATTAGATGCAGCTGAACAGAGTGGCGAAATTCCTTTTCATTCATCTGCAGGCCCTCTCTTGCCAAGGGATAATATTGCTTATGCTGACCCACATATAGAGAGGCACATGCTGCCTCGGCAACTGGTTTCTGTTATTCAGCCAGACTGGCGTGAAGCTTTAGACCTTATTTTGTTGGGCTCCCCTGAACAGTCGGTTGAAGGGATGAAAATTGTGTGCCTTGAATTAACACATGCTGCAAATGATCCTGATAGCAGTTTAAATGAGGACCTTGTTAAAGAGACCGATCGATTAGTTTCATGCTTAGCAACTATGGTTCCTAGAACATTTAACTTCAGCTTTTCCGGATCTTCTTCAAGATCATGTAAATATGTTCTTAATACACTGATGCAGACTTTTCAAATCAAACGGCTTGCCAATGCCGTTAAGGAGAGCACTCTAGACAACCTTATCACCGAGCTGCTGCTCTGGCTTCTAGATGAAAGAGTTCCTTTGATGGATGAAGGAAGCCAGTTGCTCAAAGCACTCAATGTCCTGATGCTAAAGATTTTGGAGAATGCCGACCACACGTCGTCTTTTCTCGTGCTGATAAGATTGCTGAAACCATTGGATCCCTCCAAGTGGCCGTCACCTGCATCGGCCGAAACTCTTGTCAATAGAAATCAGAAGTTTTCTGATCTGGTTGTCAAGTGTCTGATCAAGTTGACCAGGGTACTACCAACCACGATATACGATGTTGATCTTGACCGTATTCTTCATATTATTCACGTGTATTTGCAAGATCTCGGAATGGAGGAGATAAGGAGAAGGGCCGGAGCTGATGACAAGCCACTTAGGATGGTTAAAACAGTTCTGCATGAACTAGTGAAACTCCGTGGAACAGCTATAAAGGGTCATCTTTCTATGGTGCCCATAGACACAGAACCCCAGCCTATTATTCTTGCTTACATTGACCTTAATCTACAGACTATAGCAGCTACTAGGATGTTGGCTCCAGCTGGTCCTCCCATTGGGCAGACTCATTGGGGCGATGCAGCCTCAAACAATTCCACTGCCACAGCACATTCTTCTGATGCTCAACTGAAGCAAGAGCTTGCTGCTGTGTTTAAGAAGATTGGGGACAAACAAACATGCACCATTGGACTATACGAACTGTATAGAATAACCCGGCTGTACCCCAATGTTGATATATTTTCTCAGCTCCAGAATGCAAGTGAGGCATTTCGGACATACATCAGGGATGGATTGGCTCAGATGGAAAAGAATGCTGCTGCCGGGAGAACGCCATCAAGCCTCCCGATGTCGACTCCGCCTCCGTTGTCGATGAACAACGCATCTTCCTCTCCGAAATTCGGCGCTGTTTCTCCTGTTCATACCAAATCAATTGGCGCAAATACCGACATCAACAATGATGACACTGTTGCCACCAGTGCAGCTTTCAAAAATAGCAACTATTTTGGAGAGGATCGCATCGATACTAGACTTTTACCAGCTCCGGCTGTAACGATGGGGACGCTGGATGCCATTAGAGAGAGAATGAAGAGCATTCAAGCGGCAGCAGCTGCTGTGGGCAACACGCAGAATGGAGCTGACCAGCAAGCAGCAGATGGGGAGCAAGCCGCAGAAGCGCATCCCATGGATGAGAAAGCGTTGTCCGGTCTTCAGGCGCGGATGGAAAGGCTAAAGAATGGAGCTCTGGAATCTCTTTAA

Network for GWHGAAEX004546

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12348.7	CLASP_N	298	479	1.60E-10

Protein Sequence

>GWHPAAEX004546
MSTEEERLLKEAKKLPWEERLFHKNWKVRNEANIDLAAVCDSITDPRDLRLREFGSFFKKTVADSNAPVQEKALDALIAFLKAADADAGRFAKEVCDAIAAKCLTGRPKTVEKAQSVFLLWVELEAAEVFLESMEKAIKNKVAKAVVPAIDVMFQALSEFGAKVVPPKKILKMLPELFDHQDQNVRASSKGLTLELCRWIGKEPVKSILFEKMRDTMKKELEAELPNVTGSSKPTRKIRSEQDKEPEFETVTEITGNGVSDDSVADVPQDIDEYELVDPVDILTPLEKSGFWDGVKATKWSERRDAVAELTKLASTKRIAPGDFTEICRTLKKLATDVNLAVSVEAIQAIGNLARGLRTHFAGSSRILLPVLLEKLKEKKPTLTDALTQTLQALHKAGCLTLPDIIEGKYYIKVAVKNKVPLVRSLTLNWVTFCIETSNKAAVLKLHKDYVPICMECLNDGTPEVRDASFSALAAIAKMVGMRPLERSLEKLDDVRKKKLSEMISDGTNVLSTGSVGPVSTSSITVAGQVATDTSFVRRSAASMLSGKRPVQAVSTTKKSGPTKAGIVKKTDGVAPSKVSLPVGSDDAEPGEMSLEEIEQRLCSDIKTDTVMQLKSSVWKERLEAIGLLKEQVENIGELDSIAELLIRLLCAVPGWAEKNVQVQQQVIDVITYVASTAKRFPKRCVVLCLLGISERVADIKTRAHGMKCLTTFSEAVGPGFIFDRLYKILKDHKNPKVLSEGLLWMVSALEDFGISYIKLKDLIDFCKEIGLQSSAAATRNSTIKLIGVLHRFVGPDIKGFLSDIKPALLSTLEAECEKNPFEGNAVAPKKIVKTFDSTSSLPPGFDGLPQEDISAKITPNLLKNFSSPDWKVRLESIESVNKILEEAHKRIQPAGTPELFAALRGRLYDSNKNLAMATLTTIGGIASAMGLPVEKSSKGILADVLKCLGDNKKHMRECTLNTLDSWIGAVQLDKMVPYIIVALADPKIGSDGRKDIFDWLSRHLSSINDSPDAVHLLKPTASAIMEKSVDVRKAAETTLCDIMRVCGQEAVSKTLKDLRGPVLSLVLERLKLPAMIQDVMDSTKTVPSVLTTKNSSKIGKPGSNGAIDRGSKNTNKAVPMRGVPTRTSKSEYMFSAQDIALQSQAILNVKDSNKEDRERMVIRRFKFEDPRPEQIQDLECDIMKHFREDLHKRFLSTDFKKQVEGIDLLQKALPSCVKEMIELVDILLRWFVLRFCESNTTCLLKVLEFLPDFVDALKDEGYSLTEAEAATFLPCLLEKSGHNIEKVREKMRELLKQIVCIYSASKLLPYILQGLSSKNSRTKIECVDLIGWLIEHNGAEISGQLKSLQHVAALTSERDGEIRKASLNTMATAYKSLGDEVWKYVGKLSDAQRSMLDDRFKWKAREMEKRKEGKPGEGRGALRRTVRENGLDAAEQSGEIPFHSSAGPLLPRDNIAYADPHIERHMLPRQLVSVIQPDWREALDLILLGSPEQSVEGMKIVCLELTHAANDPDSSLNEDLVKETDRLVSCLATMVPRTFNFSFSGSSSRSCKYVLNTLMQTFQIKRLANAVKESTLDNLITELLLWLLDERVPLMDEGSQLLKALNVLMLKILENADHTSSFLVLIRLLKPLDPSKWPSPASAETLVNRNQKFSDLVVKCLIKLTRVLPTTIYDVDLDRILHIIHVYLQDLGMEEIRRRAGADDKPLRMVKTVLHELVKLRGTAIKGHLSMVPIDTEPQPIILAYIDLNLQTIAATRMLAPAGPPIGQTHWGDAASNNSTATAHSSDAQLKQELAAVFKKIGDKQTCTIGLYELYRITRLYPNVDIFSQLQNASEAFRTYIRDGLAQMEKNAAAGRTPSSLPMSTPPPLSMNNASSSPKFGAVSPVHTKSIGANTDINNDDTVATSAAFKNSNYFGEDRIDTRLLPAPAVTMGTLDAIRERMKSIQAAAAAVGNTQNGADQQAADGEQAAEAHPMDEKALSGLQARMERLKNGALESL

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	45.650
SRP064423	SRR2545915	Juvenile tuber	41.250
SRP108465	SRR5643513	five period of Gastrodia elata	33.570
	SRR5643514	five period of Gastrodia elata	34.790
	SRR5643515	five period of Gastrodia elata	31.720
	SRR5643524	five period of Gastrodia elata	37.250
	SRR5643525	five period of Gastrodia elata	27.050
	SRR5643528	five period of Gastrodia elata	22.730
	SRR5643658	five period of Gastrodia elata	30.370
	SRR5643659	five period of Gastrodia elata	33.410
	SRR5643660	five period of Gastrodia elata	34.630
	SRR5643661	five period of Gastrodia elata	32.450
	SRR5643662	five period of Gastrodia elata	32.470
	SRR5643663	five period of Gastrodia elata	34.210
	SRR5643664	five period of Gastrodia elata	36.350
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	33.650
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	30.280
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	33.110
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	37.090
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	37.500
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	42.570
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	39.070
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	38.830
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	26.710
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	33.260
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	29.090
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	29.090
SRP279888	Gastro	Gastrodia elata tuber	50.06
	Juven	Juvenile tuber	72.92
	Mother_Gastro	Mother tuber of Gastrodia elata	43.97
	Mother_Juven	Mother tuber of Juvenile	61.22