Gene detail

Detail information of GWHGAAEX004552/evm.TU.scaffold_15.185_evm.TU.scaffold_15.186

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1385	3.00E-57	Nucleoside phosphatase
nr	gi\|672137608\|ref\|XP_008792533.1\|	2.35E-66	PREDICTED: probable apyrase 2 isoform X2 [Phoenix dactylifera]
Swissprot	tr\|Q6Z4P2\|APY2_ORYSJ	3.00E-62	Probable apyrase 2
trEMBL	tr\|J3NAZ1\|J3NAZ1_ORYBR	3.00E-64	Uncharacterized protein {ECO:0000313\|EnsemblPlants:OB12G11490.1}
TAIR	AT3G04080	3.00E-57	apyrase 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000019	3821117	3826750	+

Transcript Sequence
>GWHTAAEX004552 CCCCCCCGAAGCCGGGGCCGCCTCGAGGATGCCCGAAATGGGTAGAGAAGAAGAACAAGAGGGAAGAGGGAAAGGAGACAAAGGAGGCTCCATTCAATGGTCGTCGGGAGAAGAGGATTCCCTCGACAAGGGGCGAAGGAGGAGGCCGCGCAAGGCAGCTAGGGCAAAACGTCTATCGCTATTGTTCAAATTTCATTAAATAAATTTTTTTAGACAGTAGCATTTCTTTTGGATAAAATATTTTTCCGATTGCAAAATTCCTCTATAAACCAACGGCATCCCTCTTCTTTAGCTACCAGCAGGCCACAATGTCTCTGTCCACTCTCTTCTCTGTAGCTCTACTAAGCTTCACATTCTGCTCGGCAAAGATTGATGAAGGGGAAAAACACTACGTTGTGGTGTTTGACGGAGGGAGCACTGGAACGAGACTCCACGTTTACTCCTTCGATCAGTACATGCAGCTCTCCAAGCTTGGAAATGGCTACGAGTTCTCCTCTAAGGCTGCAACCCACCCTCCCCTTTTTTTCTTTTCTGCTGAGAAAATTGCTGACTCTGATGCTCATTCTGCAGATTGAACCAGGCCTAAGTTCATATGCTGGTGAGCCCCAAGAAGCTCCGAGGTCCCTCATTCCATTGCTGGAGAAAGCAGAGAGCCAGATTCCCAAGGAATTCAGAGCAAAAACCCCTCTTTTTCTTGGGGCTACAGCTGGTCTTAGGAGTTTGCCAAAGGAGAGGGCCGATCAGATTATAGTTGCGGTCAGAGAATTTTTAGGGGAAAGTTCTTCGCTGGAGTATAGGCCAGAGTGGGTGAAAGTCATTGACGGGTCTCTGGAAGGTGCTTATTGTGGCTATCTTAACTATGGTATGGAAGCCACAAGGGCACAAGTTTTTAAAGCCAATGTCGATAGCTCTTACAGCTACTGCATCAACACAGGCTACAATGGCATATACAACTACAATGGTAAACAATACAATGTTTCAGCCCCACCTTCAGGCTCAGATTTCAACAAGTGCAGGAGAGAAATTTTCAATGTCTTGAACACAAAAGCAGCTTGTTTGTACAAGAGCTGCACATTTGGGGGAATATGGAGTGGCGGTGGGGGCGAAGGCCAGAAGGATCTGTTCATAGCTTCGAACTTTTATTATCGTGGTAATGAGGCTGGAATTATTGAGACTGGCTCGCCTTCAGGAAAGGCAAGCCCTTTGGACTACAAAAGGGCTGCAAGAGAAGCGTGCTCTTTAAAATTCGACAAAGTTCCAGCTCGGTATCCCACTACAAAGAAGGAATTTTGGCCCTTTGTGTGCATGGATCTTACCTACCATTACACATTGCTTGTGCATGGTTTTGGGTGAGGCCAAACCAACAGGTAACAGTGATTGGCAAGGCAAAGTATAATGATGCATACATTGAAGCAACATGGGCACTTGGAAGTGCAATTGATATATTATCTTCAAAGGCTTCTTCTTCTTCTTCTTCTTCTTCAATTTCAACCACAGCAAACATGCTTCGCTATTGGGAAAGGATGTGATGGCTTAATTGCTTGTAGCAAGCTTGTTGTCTTATTGCCTTAGAGATCAATGTTTTGTTTTGAAGTTTGCAGTGTTTTGGGTTTTGAATTTGGAGTTTAATAACTTTCTTTTTTGAAGAATGATTAGTTCTATGAAGGTTGCTCGACTTGACTGTTAAACCACGTCAAATTATCATCTAAGCCTATCAAATTATCCTCTTGGTATGTTTTCTTTTTATAGAAAAAGCCTGCTTTTGGAATATTGCAAAGCATTCTTGAGACATGTATTTTTTTTATAAAAAAAACATGCTTCTGGCGTATTGCCCGGCATTGCGAGCAATACAAGAGCTGTACCAAGACTTCGAGGGAACACATATATCGAGTATCAGAGACAGAACCCAAATTATGAATCAG

Network for GWHGAAEX004552

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01150.16	GDA1_CD39	66	157	3.30E-24
PF01150.16	GDA1_CD39	159	325	1.50E-22

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14641	APY1_2	Metabolic pathways	map01100
		Purine metabolism	map00230
		Pyrimidine metabolism	map00240

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.400
SRP064423	SRR2545915	Juvenile tuber	4.550
SRP108465	SRR5643513	five period of Gastrodia elata	12.320
	SRR5643514	five period of Gastrodia elata	9.220
	SRR5643515	five period of Gastrodia elata	10.950
	SRR5643524	five period of Gastrodia elata	11.630
	SRR5643525	five period of Gastrodia elata	1.110
	SRR5643528	five period of Gastrodia elata	0.870
	SRR5643658	five period of Gastrodia elata	1.340
	SRR5643659	five period of Gastrodia elata	11.230
	SRR5643660	five period of Gastrodia elata	9.210
	SRR5643661	five period of Gastrodia elata	10.950
	SRR5643662	five period of Gastrodia elata	9.670
	SRR5643663	five period of Gastrodia elata	14.100
	SRR5643664	five period of Gastrodia elata	9.770
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.410
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.310
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	18.020
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.990
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	7.430
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	16.140
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.890
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	25.740
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.540
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	19.750
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	19.750
SRP279888	Gastro	Gastrodia elata tuber	9.13
	Juven	Juvenile tuber	9.20
	Mother_Gastro	Mother tuber of Gastrodia elata	2.19
	Mother_Juven	Mother tuber of Juvenile	4.86