Detail information of GWHGAAEX004555/evm.TU.scaffold_15.190


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|657366985|gb|KEH15120.1|3.84E-103NAC transcription factor-like protein, partial [Medicago truncatula]
Swissprottr|Q8H4S4|NAC10_ORYSJ1.00E-80NAC transcription factor ONAC010
trEMBLtr|A0A072TNF6|A0A072TNF6_MEDTR1.00E-103NAC transcription factor-like protein {ECO:0000313|EMBL:KEH15120.1} (Fragment)
TAIRAT1G694906.00E-78NAC-like, activated by AP3/PI

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001939240693925500+
Transcript Sequence

Network for GWHGAAEX004555

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM101369.90E-36
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.680
SRR2545915Juvenile tuber22.070
SRP108465SRR5643513five period of Gastrodia elata68.410
SRR5643514five period of Gastrodia elata18.240
SRR5643515five period of Gastrodia elata64.590
SRR5643524five period of Gastrodia elata26.260
SRR5643525five period of Gastrodia elata625.480
SRR5643528five period of Gastrodia elata1085.740
SRR5643658five period of Gastrodia elata437.790
SRR5643659five period of Gastrodia elata20.630
SRR5643660five period of Gastrodia elata15.130
SRR5643661five period of Gastrodia elata22.950
SRR5643662five period of Gastrodia elata146.320
SRR5643663five period of Gastrodia elata58.390
SRR5643664five period of Gastrodia elata140.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.940
SRR6049655Rhizomagastrodiae_C368-T10_good_115.040
SRR6049656Rhizomagastrodiae_C368-T07_good_132.180
SRR6049657Rhizomagastrodiae_C368-T07_good_153.170
SRR6049658Rhizomagastrodiae_C368-T04_good_1104.210
SRR6049659Rhizomagastrodiae_C368-T04_good_1129.540
SRR6049660Rhizomagastrodiae_C368-T01_good_156.410
SRR6049661Rhizomagastrodiae_C368-T04_good_183.240
SRR6049662Rhizomagastrodiae_C368-T01_good_122.940
SRR6049663Rhizomagastrodiae_C368-T01_good_133.210
SRR6049664Rhizomagastrodiae_C368-T10_good_120.040
SRR6049665Rhizomagastrodiae_C368-T10_good_120.040
SRP279888GastroGastrodia elata tuber 134.27
JuvenJuvenile tuber8.56
Mother_GastroMother tuber of Gastrodia elata 384.81
Mother_JuvenMother tuber of Juvenile 181.19