Detail information of GWHGAAEX004556/evm.TU.scaffold_15.193


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|37521508|ref|NP_924885.1|8.00E-24cyclopropane-fatty-acyl-phospholipid synthase [Gloeobacter violaceus PCC 7421]
nrgi|743789306|ref|XP_010922871.1|0PREDICTED: gibberellic acid methyltransferase 2 [Elaeis guineensis]
Swissprottr|Q5XF78|GAMT2_ARATH1.00E-151Gibberellic acid methyltransferase 2
trEMBLtr|D7SLP8|D7SLP8_VITVI3.00E-179Putative uncharacterized protein {ECO:0000313|EMBL:CBI16576.3}
TAIRAT5G563001.00E-151gibberellic acid methyltransferase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001940332644035065+
Transcript Sequence

Network for GWHGAAEX004556

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03492.14Methyltransf_7673731.20E-94
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.280
SRR2545915Juvenile tuber2.010
SRP108465SRR5643513five period of Gastrodia elata2.810
SRR5643514five period of Gastrodia elata0.940
SRR5643515five period of Gastrodia elata2.710
SRR5643524five period of Gastrodia elata0.890
SRR5643525five period of Gastrodia elata3.880
SRR5643528five period of Gastrodia elata0.780
SRR5643658five period of Gastrodia elata2.840
SRR5643659five period of Gastrodia elata5.870
SRR5643660five period of Gastrodia elata7.770
SRR5643661five period of Gastrodia elata6.470
SRR5643662five period of Gastrodia elata5.350
SRR5643663five period of Gastrodia elata2.910
SRR5643664five period of Gastrodia elata8.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.830
SRR6049655Rhizomagastrodiae_C368-T10_good_11.820
SRR6049656Rhizomagastrodiae_C368-T07_good_12.440
SRR6049657Rhizomagastrodiae_C368-T07_good_11.890
SRR6049658Rhizomagastrodiae_C368-T04_good_11.940
SRR6049659Rhizomagastrodiae_C368-T04_good_12.390
SRR6049660Rhizomagastrodiae_C368-T01_good_11.300
SRR6049661Rhizomagastrodiae_C368-T04_good_13.470
SRR6049662Rhizomagastrodiae_C368-T01_good_11.300
SRR6049663Rhizomagastrodiae_C368-T01_good_10.800
SRR6049664Rhizomagastrodiae_C368-T10_good_11.900
SRR6049665Rhizomagastrodiae_C368-T10_good_11.900
SRP279888GastroGastrodia elata tuber 3.81
JuvenJuvenile tuber2.93
Mother_GastroMother tuber of Gastrodia elata 29.70
Mother_JuvenMother tuber of Juvenile 41.11