Detail information of GWHGAAEX004572/evm.TU.scaffold_15.215


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29274.00E-139Membrane component of ER protein translocation complex
nrgi|695037124|ref|XP_009406043.1|6.31E-161PREDICTED: uncharacterized protein LOC103989034 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TA00|M0TA00_MUSAM2.00E-161Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P25040_001}
TAIRAT3G209204.00E-139translocation protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001947387754781796+
Transcript Sequence

Network for GWHGAAEX004572

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03839.15Sec62832222.40E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12275SEC62 Protein export map03060
Protein processing in endoplasmic reticulummap04141

Gene Ontology

GO term OntologyName
GO:0015031Biological Processprotein transport
GO:0030176Cellular Componentintegral component of endoplasmic reticulum membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms157.850
SRR2545915Juvenile tuber149.490
SRP108465SRR5643513five period of Gastrodia elata84.800
SRR5643514five period of Gastrodia elata68.760
SRR5643515five period of Gastrodia elata74.860
SRR5643524five period of Gastrodia elata69.180
SRR5643525five period of Gastrodia elata58.460
SRR5643528five period of Gastrodia elata53.770
SRR5643658five period of Gastrodia elata48.810
SRR5643659five period of Gastrodia elata75.840
SRR5643660five period of Gastrodia elata87.680
SRR5643661five period of Gastrodia elata110.550
SRR5643662five period of Gastrodia elata132.970
SRR5643663five period of Gastrodia elata107.900
SRR5643664five period of Gastrodia elata140.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_192.330
SRR6049655Rhizomagastrodiae_C368-T10_good_157.020
SRR6049656Rhizomagastrodiae_C368-T07_good_182.290
SRR6049657Rhizomagastrodiae_C368-T07_good_1109.600
SRR6049658Rhizomagastrodiae_C368-T04_good_182.290
SRR6049659Rhizomagastrodiae_C368-T04_good_188.260
SRR6049660Rhizomagastrodiae_C368-T01_good_180.540
SRR6049661Rhizomagastrodiae_C368-T04_good_175.740
SRR6049662Rhizomagastrodiae_C368-T01_good_173.220
SRR6049663Rhizomagastrodiae_C368-T01_good_176.730
SRR6049664Rhizomagastrodiae_C368-T10_good_177.330
SRR6049665Rhizomagastrodiae_C368-T10_good_177.330
SRP279888GastroGastrodia elata tuber 79.46
JuvenJuvenile tuber100.67
Mother_GastroMother tuber of Gastrodia elata 63.09
Mother_JuvenMother tuber of Juvenile 78.25