Detail information of GWHGAAEX004602/evm.TU.scaffold_15.267


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|192360967|ref|YP_001980889.1|3.00E-85serine acetyltransferase [Cellvibrio japonicus Ueda107]
KOGKOG47503.00E-114Serine O-acetyltransferase
nrgi|672161575|ref|XP_008800610.1|3.42E-132PREDICTED: serine acetyltransferase 1, chloroplastic-like [Phoenix dactylifera]
Swissprottr|Q39218|SAT3_ARATH8.00E-115Serine acetyltransferase 3, mitochondrial (Precursor)
trEMBLtr|K4CHL2|K4CHL2_SOLLC8.00E-121Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc07g065340.1.1}
TAIRAT3G131103.00E-114serine acetyltransferase 2;2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001982984178299424+
Transcript Sequence

Network for GWHGAAEX004602

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06426.13SATase_N721773.70E-31
PF00132.23Hexapep2572912.80E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00640cysE Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Sulfur metabolismmap00920
Cysteine and methionine metabolismmap00270
Biofilm formation - Vibrio choleraemap05111

Gene Ontology

GO term OntologyName
GO:0006535Biological Processcysteine biosynthetic process from serine
GO:0009001Molecular Functionserine O-acetyltransferase activity
GO:0016740Molecular Functiontransferase activity
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms63.740
SRR2545915Juvenile tuber47.740
SRP108465SRR5643513five period of Gastrodia elata70.510
SRR5643514five period of Gastrodia elata129.310
SRR5643515five period of Gastrodia elata87.190
SRR5643524five period of Gastrodia elata118.550
SRR5643525five period of Gastrodia elata166.820
SRR5643528five period of Gastrodia elata214.500
SRR5643658five period of Gastrodia elata268.790
SRR5643659five period of Gastrodia elata116.870
SRR5643660five period of Gastrodia elata133.650
SRR5643661five period of Gastrodia elata43.650
SRR5643662five period of Gastrodia elata51.010
SRR5643663five period of Gastrodia elata37.280
SRR5643664five period of Gastrodia elata60.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_199.000
SRR6049655Rhizomagastrodiae_C368-T10_good_1110.320
SRR6049656Rhizomagastrodiae_C368-T07_good_196.370
SRR6049657Rhizomagastrodiae_C368-T07_good_1108.200
SRR6049658Rhizomagastrodiae_C368-T04_good_1135.820
SRR6049659Rhizomagastrodiae_C368-T04_good_1179.260
SRR6049660Rhizomagastrodiae_C368-T01_good_1118.610
SRR6049661Rhizomagastrodiae_C368-T04_good_1106.560
SRR6049662Rhizomagastrodiae_C368-T01_good_150.300
SRR6049663Rhizomagastrodiae_C368-T01_good_194.900
SRR6049664Rhizomagastrodiae_C368-T10_good_169.240
SRR6049665Rhizomagastrodiae_C368-T10_good_169.240
SRP279888GastroGastrodia elata tuber 84.49
JuvenJuvenile tuber31.45
Mother_GastroMother tuber of Gastrodia elata 107.53
Mother_JuvenMother tuber of Juvenile 57.66