Detail information of GWHGAAEX004615/evm.TU.scaffold_150.21
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 1.00E-25 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG1187 | 0 | Serine/threonine protein kinase |
| nr | gi|743820538|ref|XP_010931807.1| | 0 | PREDICTED: serine/threonine-protein kinase CDL1 [Elaeis guineensis] |
| Swissprot | tr|Q9FE20|PBS1_ARATH | 2.00E-172 | Serine/threonine-protein kinase PBS1 |
| trEMBL | tr|M0RVG1|M0RVG1_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P25810_001} |
| TAIR | AT3G20530 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000148 | 1303053 | 1327393 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004615
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 82 | 293 | 6.60E-46 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.560 |
| SRR2545915 | Juvenile tuber | 1.540 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.670 |
| SRR5643514 | five period of Gastrodia elata | 2.090 | |
| SRR5643515 | five period of Gastrodia elata | 3.030 | |
| SRR5643524 | five period of Gastrodia elata | 2.320 | |
| SRR5643525 | five period of Gastrodia elata | 4.880 | |
| SRR5643528 | five period of Gastrodia elata | 6.760 | |
| SRR5643658 | five period of Gastrodia elata | 6.580 | |
| SRR5643659 | five period of Gastrodia elata | 3.290 | |
| SRR5643660 | five period of Gastrodia elata | 2.720 | |
| SRR5643661 | five period of Gastrodia elata | 4.190 | |
| SRR5643662 | five period of Gastrodia elata | 3.880 | |
| SRR5643663 | five period of Gastrodia elata | 3.990 | |
| SRR5643664 | five period of Gastrodia elata | 4.890 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.360 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.630 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.220 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.980 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.320 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.690 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.720 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.830 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 2.160 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.780 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.490 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.490 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.63 |
| Juven | Juvenile tuber | 4.02 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.99 | |
| Mother_Juven | Mother tuber of Juvenile | 4.19 |