Detail information of GWHGAAEX004620/evm.TU.scaffold_150.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17562.00E-79Histone 2A
nrgi|672196065|ref|XP_008776708.1|1.31E-84PREDICTED: probable histone H2A.3 [Phoenix dactylifera]
Swissprottr|Q43312|H2A7_WHEAT6.00E-81Protein H2A.7
trEMBLtr|M5X7W0|M5X7W0_PRUPE3.00E-82Histone H2A {ECO:0000256|RuleBase:RU003556}
TAIRAT4G272302.00E-79histone H2A 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014822216122222739-
Transcript Sequence

Network for GWHGAAEX004620

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00125.23Histone13902.00E-14
PF16211.4Histone_H2A_C931241.50E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11251H2A Necroptosis map04217

Gene Ontology

GO term OntologyName
GO:0046982Molecular Functionprotein heterodimerization activity
GO:0003677Molecular FunctionDNA binding
GO:0000786Cellular Componentnucleosome
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms68.010
SRR2545915Juvenile tuber98.510
SRP108465SRR5643513five period of Gastrodia elata297.040
SRR5643514five period of Gastrodia elata378.620
SRR5643515five period of Gastrodia elata274.130
SRR5643524five period of Gastrodia elata315.370
SRR5643525five period of Gastrodia elata270.170
SRR5643528five period of Gastrodia elata237.890
SRR5643658five period of Gastrodia elata175.830
SRR5643659five period of Gastrodia elata179.340
SRR5643660five period of Gastrodia elata177.550
SRR5643661five period of Gastrodia elata185.540
SRR5643662five period of Gastrodia elata188.360
SRR5643663five period of Gastrodia elata175.200
SRR5643664five period of Gastrodia elata158.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1163.610
SRR6049655Rhizomagastrodiae_C368-T10_good_1176.990
SRR6049656Rhizomagastrodiae_C368-T07_good_1242.850
SRR6049657Rhizomagastrodiae_C368-T07_good_1141.280
SRR6049658Rhizomagastrodiae_C368-T04_good_1137.870
SRR6049659Rhizomagastrodiae_C368-T04_good_1105.950
SRR6049660Rhizomagastrodiae_C368-T01_good_1147.590
SRR6049661Rhizomagastrodiae_C368-T04_good_1150.390
SRR6049662Rhizomagastrodiae_C368-T01_good_1242.060
SRR6049663Rhizomagastrodiae_C368-T01_good_1188.290
SRR6049664Rhizomagastrodiae_C368-T10_good_1347.290
SRR6049665Rhizomagastrodiae_C368-T10_good_1347.290
SRP279888GastroGastrodia elata tuber 155.64
JuvenJuvenile tuber129.17
Mother_GastroMother tuber of Gastrodia elata 346.73
Mother_JuvenMother tuber of Juvenile 217.52