Detail information of GWHGAAEX004622/evm.TU.scaffold_151.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG22657.00E-93Nuclear distribution protein NUDC
nrgi|743827797|ref|XP_010933682.1|5.62E-100PREDICTED: nudC domain-containing protein 2-like [Elaeis guineensis]
trEMBLtr|M0TAQ3|M0TAQ3_MUSAM4.00E-95Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P27580_001}
TAIRAT5G587407.00E-93HSP20-like chaperones superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001551791945234+
Transcript Sequence

Network for GWHGAAEX004622

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04969.15CS21933.80E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms65.150
SRR2545915Juvenile tuber81.350
SRP108465SRR5643513five period of Gastrodia elata41.460
SRR5643514five period of Gastrodia elata60.330
SRR5643515five period of Gastrodia elata49.340
SRR5643524five period of Gastrodia elata59.910
SRR5643525five period of Gastrodia elata122.470
SRR5643528five period of Gastrodia elata133.870
SRR5643658five period of Gastrodia elata125.650
SRR5643659five period of Gastrodia elata40.610
SRR5643660five period of Gastrodia elata31.550
SRR5643661five period of Gastrodia elata35.330
SRR5643662five period of Gastrodia elata40.260
SRR5643663five period of Gastrodia elata48.230
SRR5643664five period of Gastrodia elata36.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.780
SRR6049655Rhizomagastrodiae_C368-T10_good_156.510
SRR6049656Rhizomagastrodiae_C368-T07_good_145.090
SRR6049657Rhizomagastrodiae_C368-T07_good_139.400
SRR6049658Rhizomagastrodiae_C368-T04_good_140.000
SRR6049659Rhizomagastrodiae_C368-T04_good_145.760
SRR6049660Rhizomagastrodiae_C368-T01_good_131.070
SRR6049661Rhizomagastrodiae_C368-T04_good_141.410
SRR6049662Rhizomagastrodiae_C368-T01_good_146.970
SRR6049663Rhizomagastrodiae_C368-T01_good_145.890
SRR6049664Rhizomagastrodiae_C368-T10_good_156.640
SRR6049665Rhizomagastrodiae_C368-T10_good_156.640
SRP279888GastroGastrodia elata tuber 53.09
JuvenJuvenile tuber30.87
Mother_GastroMother tuber of Gastrodia elata 128.29
Mother_JuvenMother tuber of Juvenile 58.70