Detail information of GWHGAAEX004624/evm.TU.scaffold_151.3
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|294508395|ref|YP_003572453.1| | 2.00E-158 | Fumarylacetoacetate (FAA) hydrolase [Salinibacter ruber M8] |
| KOG | KOG2843 | 0 | Fumarylacetoacetase |
| nr | gi|720045091|ref|XP_010270099.1| | 0 | PREDICTED: fumarylacetoacetase [Nelumbo nucifera] |
| trEMBL | tr|M0SQ99|M0SQ99_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P19360_001} |
| TAIR | AT1G12050 | 0 | fumarylacetoacetase, putative |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000155 | 73657 | 101039 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004624
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF09298.10 | FAA_hydrolase_N | 18 | 124 | 3.00E-31 |
| PF01557.17 | FAA_hydrolase | 130 | 417 | 1.30E-56 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01555 | FAH, fahA | Metabolic pathways | map01100 |
| Microbial metabolism in diverse environments | map01120 | ||
| Tyrosine metabolism | map00350 | ||
| Styrene degradation | map00643 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009072 | Biological Process | aromatic amino acid family metabolic process |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0004334 | Molecular Function | fumarylacetoacetase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 33.250 |
| SRR2545915 | Juvenile tuber | 37.020 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 28.470 |
| SRR5643514 | five period of Gastrodia elata | 38.570 | |
| SRR5643515 | five period of Gastrodia elata | 31.380 | |
| SRR5643524 | five period of Gastrodia elata | 32.790 | |
| SRR5643525 | five period of Gastrodia elata | 60.700 | |
| SRR5643528 | five period of Gastrodia elata | 56.550 | |
| SRR5643658 | five period of Gastrodia elata | 62.760 | |
| SRR5643659 | five period of Gastrodia elata | 27.300 | |
| SRR5643660 | five period of Gastrodia elata | 28.990 | |
| SRR5643661 | five period of Gastrodia elata | 26.470 | |
| SRR5643662 | five period of Gastrodia elata | 27.300 | |
| SRR5643663 | five period of Gastrodia elata | 28.130 | |
| SRR5643664 | five period of Gastrodia elata | 30.950 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 34.740 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 33.570 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 39.840 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 29.960 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 40.160 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 32.150 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 35.810 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 39.930 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 33.730 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 30.710 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 37.690 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 37.690 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 47.26 |
| Juven | Juvenile tuber | 49.59 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 48.00 | |
| Mother_Juven | Mother tuber of Juvenile | 47.87 |