Detail information of GWHGAAEX004627/evm.TU.scaffold_151.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31881.00E-154Uncharacterized conserved protein
nrgi|224086401|ref|XP_002307881.1|2.60E-158hypothetical protein POPTR_0006s01310g [Populus trichocarpa]
trEMBLtr|B9HCS0|B9HCS0_POPTR1.00E-158Uncharacterized protein {ECO:0000313|EMBL:EEE91404.1}
TAIRAT4G125901.00E-154Protein of unknown function DUF106, transmembrane

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000155133474165298+
Transcript Sequence

Network for GWHGAAEX004627

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01956.15DUF10641921.10E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms100.560
SRR2545915Juvenile tuber113.000
SRP108465SRR5643513five period of Gastrodia elata66.410
SRR5643514five period of Gastrodia elata58.780
SRR5643515five period of Gastrodia elata63.060
SRR5643524five period of Gastrodia elata61.240
SRR5643525five period of Gastrodia elata55.100
SRR5643528five period of Gastrodia elata57.600
SRR5643658five period of Gastrodia elata60.650
SRR5643659five period of Gastrodia elata61.860
SRR5643660five period of Gastrodia elata65.180
SRR5643661five period of Gastrodia elata61.810
SRR5643662five period of Gastrodia elata64.950
SRR5643663five period of Gastrodia elata56.340
SRR5643664five period of Gastrodia elata65.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1113.360
SRR6049655Rhizomagastrodiae_C368-T10_good_195.870
SRR6049656Rhizomagastrodiae_C368-T07_good_199.590
SRR6049657Rhizomagastrodiae_C368-T07_good_1114.850
SRR6049658Rhizomagastrodiae_C368-T04_good_1148.290
SRR6049659Rhizomagastrodiae_C368-T04_good_1177.300
SRR6049660Rhizomagastrodiae_C368-T01_good_1126.780
SRR6049661Rhizomagastrodiae_C368-T04_good_1135.790
SRR6049662Rhizomagastrodiae_C368-T01_good_186.720
SRR6049663Rhizomagastrodiae_C368-T01_good_1123.530
SRR6049664Rhizomagastrodiae_C368-T10_good_199.590
SRR6049665Rhizomagastrodiae_C368-T10_good_199.590
SRP279888GastroGastrodia elata tuber 73.17
JuvenJuvenile tuber71.97
Mother_GastroMother tuber of Gastrodia elata 57.20
Mother_JuvenMother tuber of Juvenile 58.85