Detail information of GWHGAAEX004629/evm.TU.scaffold_151.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|158340166|ref|YP_001521336.1|2.00E-47oxidoreductase, short chain dehydrogenase/reductase family protein [Acaryochloris marina MBIC11017]
KOGKOG07252.00E-69Reductases with broad range of substrate specificities
nrgi|672185973|ref|XP_008812964.1|6.13E-89PREDICTED: short-chain dehydrogenase reductase 3b-like [Phoenix dactylifera]
Swissprottr|O80713|SDR3A_ARATH6.00E-70Short-chain dehydrogenase reductase 3a
trEMBLtr|A0A022S3C8|A0A022S3C8_ERYGU1.00E-82Uncharacterized protein {ECO:0000313|EMBL:EYU46864.1}
TAIRAT2G471302.00E-69NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000155185960186966+
Transcript Sequence

Network for GWHGAAEX004629

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13561.5adh_short_C2182541.10E-60
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.180
SRR2545915Juvenile tuber1.140
SRP108465SRR5643513five period of Gastrodia elata58.100
SRR5643514five period of Gastrodia elata14.450
SRR5643515five period of Gastrodia elata45.900
SRR5643524five period of Gastrodia elata13.560
SRR5643525five period of Gastrodia elata0.180
SRR5643528five period of Gastrodia elata0.360
SRR5643658five period of Gastrodia elata0.070
SRR5643659five period of Gastrodia elata4.950
SRR5643660five period of Gastrodia elata1.670
SRR5643661five period of Gastrodia elata3.800
SRR5643662five period of Gastrodia elata7.410
SRR5643663five period of Gastrodia elata4.260
SRR5643664five period of Gastrodia elata0.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.640
SRR6049655Rhizomagastrodiae_C368-T10_good_153.040
SRR6049656Rhizomagastrodiae_C368-T07_good_153.220
SRR6049657Rhizomagastrodiae_C368-T07_good_143.660
SRR6049658Rhizomagastrodiae_C368-T04_good_174.870
SRR6049659Rhizomagastrodiae_C368-T04_good_183.010
SRR6049660Rhizomagastrodiae_C368-T01_good_185.660
SRR6049661Rhizomagastrodiae_C368-T04_good_1104.480
SRR6049662Rhizomagastrodiae_C368-T01_good_182.940
SRR6049663Rhizomagastrodiae_C368-T01_good_159.660
SRR6049664Rhizomagastrodiae_C368-T10_good_187.520
SRR6049665Rhizomagastrodiae_C368-T10_good_187.520
SRP279888GastroGastrodia elata tuber 0.38
JuvenJuvenile tuber3.00
Mother_GastroMother tuber of Gastrodia elata 2.89
Mother_JuvenMother tuber of Juvenile 0.64