Detail information of GWHGAAEX004630/evm.TU.scaffold_151.10


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|470179273|ref|YP_007565317.1|7.00E-45putative oxidoreductase [Ilumatobacter coccineus YM16-304]
KOGKOG07256.00E-69Reductases with broad range of substrate specificities
nrgi|672185973|ref|XP_008812964.1|1.41E-93PREDICTED: short-chain dehydrogenase reductase 3b-like [Phoenix dactylifera]
Swissprottr|O80713|SDR3A_ARATH2.00E-69Short-chain dehydrogenase reductase 3a
trEMBLtr|I1GL83|I1GL83_BRADI7.00E-82Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G02790.1}
TAIRAT2G471306.00E-69NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000155192739193755+
Transcript Sequence

Network for GWHGAAEX004630

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13561.5adh_short_C2182563.40E-58
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.670
SRR2545915Juvenile tuber0.840
SRP108465SRR5643513five period of Gastrodia elata4.930
SRR5643514five period of Gastrodia elata1.910
SRR5643515five period of Gastrodia elata7.470
SRR5643524five period of Gastrodia elata3.490
SRR5643525five period of Gastrodia elata0.440
SRR5643528five period of Gastrodia elata0.450
SRR5643658five period of Gastrodia elata0.070
SRR5643659five period of Gastrodia elata4.100
SRR5643660five period of Gastrodia elata4.390
SRR5643661five period of Gastrodia elata2.390
SRR5643662five period of Gastrodia elata1.020
SRR5643663five period of Gastrodia elata1.140
SRR5643664five period of Gastrodia elata0.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_165.350
SRR6049655Rhizomagastrodiae_C368-T10_good_136.470
SRR6049656Rhizomagastrodiae_C368-T07_good_1108.950
SRR6049657Rhizomagastrodiae_C368-T07_good_1104.150
SRR6049658Rhizomagastrodiae_C368-T04_good_1169.260
SRR6049659Rhizomagastrodiae_C368-T04_good_1156.380
SRR6049660Rhizomagastrodiae_C368-T01_good_1148.380
SRR6049661Rhizomagastrodiae_C368-T04_good_1228.330
SRR6049662Rhizomagastrodiae_C368-T01_good_1103.100
SRR6049663Rhizomagastrodiae_C368-T01_good_183.900
SRR6049664Rhizomagastrodiae_C368-T10_good_149.020
SRR6049665Rhizomagastrodiae_C368-T10_good_149.020
SRP279888GastroGastrodia elata tuber 5.31
JuvenJuvenile tuber2.59
Mother_GastroMother tuber of Gastrodia elata 11.22
Mother_JuvenMother tuber of Juvenile 0.54